Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFRAP16234 AC034229.2-201ENST00000566945 2508 ntBASIC6.4□□□□□ -1.39
PDGFRAP16234 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFRAP16234 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFRAP16234 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
PDGFRAP16234 AC104966.1-201ENST00000467010 1464 ntBASIC6.4□□□□□ -1.39
PDGFRAP16234 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFRAP16234 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFRAP16234 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
PDGFRAP16234 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFRAP16234 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFRAP16234 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFRAP16234 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFRAP16234 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PDGFRAP16234 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFRAP16234 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.39□□□□□ -1.39
PDGFRAP16234 SNX18P3-202ENST00000565670 1750 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 SNORA21-201ENST00000362423 132 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 RNA5SP110-201ENST00000362638 115 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
PDGFRAP16234 AL096829.1-201ENST00000413677 457 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 RPS7P8-201ENST00000418311 581 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFRAP16234 AC015977.1-201ENST00000418887 292 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFRAP16234 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFRAP16234 GAPDHP34-201ENST00000432112 823 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFRAP16234 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFRAP16234 SLC25A51P1-201ENST00000468432 871 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFRAP16234 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFRAP16234 GOLGA5P1-201ENST00000507317 980 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 LDHAP1-201ENST00000509421 992 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFRAP16234 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFRAP16234 RN7SKP70-201ENST00000516655 271 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 AC009879.1-201ENST00000520029 839 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 AC007346.1-201ENST00000569208 867 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 AP005901.4-201ENST00000577336 569 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFRAP16234 MIR4701-201ENST00000583094 63 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFRAP16234 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFRAP16234 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.39□□□□□ -1.39
PDGFRAP16234 AC004890.3-201ENST00000605566 1095 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 AC092681.3-201ENST00000609463 678 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFRAP16234 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PDGFRAP16234 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.39□□□□□ -1.39
PDGFRAP16234 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
PDGFRAP16234 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFRAP16234 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFRAP16234 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFRAP16234 AC068769.1-201ENST00000474767 2426 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PDGFRAP16234 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.38□□□□□ -1.39
PDGFRAP16234 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
PDGFRAP16234 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
PDGFRAP16234 RNU105B-201ENST00000364478 208 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.38□□□□□ -1.39
PDGFRAP16234 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PDGFRAP16234 AL050305.1-201ENST00000399993 1230 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFRAP16234 RPL35AP31-201ENST00000418340 337 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 RPS15AP30-201ENST00000420976 390 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.38□□□□□ -1.39
PDGFRAP16234 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFRAP16234 AMYP1-201ENST00000440059 1023 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 AC002553.3-201ENST00000453002 341 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.38□□□□□ -1.39
PDGFRAP16234 AC114728.1-201ENST00000488289 483 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFRAP16234 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.38□□□□□ -1.39
PDGFRAP16234 RN7SKP35-201ENST00000517210 151 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.38□□□□□ -1.39
PDGFRAP16234 TOMM20P1-201ENST00000534518 427 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFRAP16234 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFRAP16234 RPL12P48-201ENST00000605620 304 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFRAP16234 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms