Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 SNORA58-201ENST00000505219 137 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 DCAF13P2-201ENST00000514188 555 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL6A2P12110 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.73□□□□□ -1.33
COL6A2P12110 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 MIR4685-201ENST00000578185 69 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 MIR5010-201ENST00000582846 120 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 AL589765.5-201ENST00000596133 515 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 PRR13P3-201ENST00000603578 376 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 AL358072.1-201ENST00000604156 575 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 AL592494.3-201ENST00000609485 464 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 AP000577.1-201ENST00000624366 878 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL6A2P12110 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL6A2P12110 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL6A2P12110 AC005618.1-201ENST00000606901 3148 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.73□□□□□ -1.33
COL6A2P12110 ATP5BP1-201ENST00000411980 1574 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL6A2P12110 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COL6A2P12110 HSPD1P11-201ENST00000508643 1702 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL6A2P12110 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.73□□□□□ -1.33
COL6A2P12110 AL731556.1-201ENST00000394628 3711 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COL6A2P12110 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
COL6A2P12110 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.72□□□□□ -1.33
COL6A2P12110 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
COL6A2P12110 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.72□□□□□ -1.33
COL6A2P12110 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.72□□□□□ -1.33
COL6A2P12110 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
COL6A2P12110 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL6A2P12110 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 RNA5SP188-201ENST00000362916 129 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 RNA5SP114-201ENST00000363780 113 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 SNORD56.4-201ENST00000363883 71 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 SNORD116-1-201ENST00000384335 95 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 GSTA12P-201ENST00000402398 508 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.72□□□□□ -1.33
COL6A2P12110 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.72□□□□□ -1.33
COL6A2P12110 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.72□□□□□ -1.33
COL6A2P12110 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.72□□□□□ -1.33
COL6A2P12110 YWHAZP5-201ENST00000419975 730 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AC090960.1-201ENST00000421072 306 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.72□□□□□ -1.33
COL6A2P12110 GAPDHP69-201ENST00000425504 1008 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AL645936.2-201ENST00000430565 928 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 VDAC2P3-201ENST00000430995 828 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.72□□□□□ -1.33
COL6A2P12110 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.72□□□□□ -1.33
COL6A2P12110 PCMTD1P3-201ENST00000451824 472 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 Z95152.1-201ENST00000453556 656 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 MEF2AP1-201ENST00000454867 863 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 PTGES3P5-201ENST00000455109 434 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 RPSAP48-201ENST00000466509 889 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.72□□□□□ -1.33
COL6A2P12110 H3F3AP3-201ENST00000497682 407 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AC021193.1-201ENST00000511607 420 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.72□□□□□ -1.33
COL6A2P12110 RNA5SP278-201ENST00000517055 102 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 IGLC4-201ENST00000517690 248 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.72□□□□□ -1.33
COL6A2P12110 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.72□□□□□ -1.33
COL6A2P12110 MTCO2P15-201ENST00000532655 656 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.72□□□□□ -1.33
COL6A2P12110 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
COL6A2P12110 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 AC021483.2-201ENST00000567415 758 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 RN7SL697P-201ENST00000582484 299 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AC005244.1-201ENST00000582566 339 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.72□□□□□ -1.33
COL6A2P12110 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.72□□□□□ -1.33
COL6A2P12110 AC061975.8-201ENST00000587058 721 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AC124856.1-201ENST00000600819 896 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AC108865.2-201ENST00000606881 432 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AC024060.1-201ENST00000607052 494 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AL031777.2-201ENST00000611953 196 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AC011939.3-201ENST00000613686 466 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AC009318.3-201ENST00000616916 503 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AC005899.7-201ENST00000618199 588 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 AL354718.1-201ENST00000619764 589 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 BX005040.2-201ENST00000620504 370 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms