Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 GUCY1B2-204ENST00000531898 1979 ntBASIC6.09□□□□□ -1.43
PCNAP12004 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 MSL3P1-202ENST00000440028 1468 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AC217777.1-201ENST00000570034 1471 ntBASIC6.09□□□□□ -1.43
PCNAP12004 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 OR51C1P-202ENST00000641159 1444 ntBASIC6.09□□□□□ -1.43
PCNAP12004 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.09□□□□□ -1.43
PCNAP12004 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
PCNAP12004 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.09□□□□□ -1.43
PCNAP12004 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.09□□□□□ -1.43
PCNAP12004 Y_RNA.62-201ENST00000362840 99 ntBASIC6.09□□□□□ -1.43
PCNAP12004 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 AC003045.1-201ENST00000398779 713 ntBASIC6.09□□□□□ -1.43
PCNAP12004 RN7SKP129-201ENST00000410288 299 ntBASIC6.09□□□□□ -1.43
PCNAP12004 GABARAPL3-201ENST00000412799 354 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AL356806.1-201ENST00000422524 916 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AC007064.3-201ENST00000422608 359 ntBASIC6.09□□□□□ -1.43
PCNAP12004 KIF4CP-201ENST00000422742 1279 ntBASIC6.09□□□□□ -1.43
PCNAP12004 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 AC021876.1-201ENST00000425959 359 ntBASIC6.09□□□□□ -1.43
PCNAP12004 OR6R1P-201ENST00000431838 940 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AL022324.2-201ENST00000434827 780 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 AL445991.1-201ENST00000450381 475 ntBASIC6.09□□□□□ -1.43
PCNAP12004 OR52Y1P-201ENST00000452418 828 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 RN7SL39P-201ENST00000462264 297 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 RNU6-943P-201ENST00000516960 98 ntBASIC6.09□□□□□ -1.43
PCNAP12004 RNA5SP400-201ENST00000517155 111 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.09□□□□□ -1.43
PCNAP12004 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.09□□□□□ -1.43
PCNAP12004 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
PCNAP12004 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC6.09□□□□□ -1.43
PCNAP12004 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.09□□□□□ -1.43
PCNAP12004 RN7SL475P-201ENST00000583379 298 ntBASIC6.09□□□□□ -1.43
PCNAP12004 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.09□□□□□ -1.43
PCNAP12004 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.09□□□□□ -1.43
PCNAP12004 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.09□□□□□ -1.43
PCNAP12004 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.09□□□□□ -1.43
PCNAP12004 AC092474.3-201ENST00000603022 568 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AL445649.1-201ENST00000615941 691 ntBASIC6.09□□□□□ -1.43
PCNAP12004 MIR7159-201ENST00000620587 66 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AC211486.4-201ENST00000621495 113 ntBASIC6.09□□□□□ -1.43
PCNAP12004 AL356094.1-201ENST00000624663 1212 ntBASIC6.09□□□□□ -1.43
PCNAP12004 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.09□□□□□ -1.43
PCNAP12004 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCNAP12004 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.09□□□□□ -1.43
PCNAP12004 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.09□□□□□ -1.43
PCNAP12004 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PCNAP12004 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.09□□□□□ -1.44
PCNAP12004 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.09□□□□□ -1.44
PCNAP12004 THAP12P8-201ENST00000447914 2115 ntBASIC6.08□□□□□ -1.44
PCNAP12004 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.08□□□□□ -1.44
PCNAP12004 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
PCNAP12004 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PCNAP12004 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
PCNAP12004 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PCNAP12004 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PCNAP12004 RNU6-819P-201ENST00000364116 107 ntBASIC6.08□□□□□ -1.44
PCNAP12004 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.08□□□□□ -1.44
PCNAP12004 MIR433-201ENST00000384837 93 ntBASIC6.08□□□□□ -1.44
PCNAP12004 RN7SKP161-201ENST00000411110 305 ntBASIC6.08□□□□□ -1.44
PCNAP12004 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.08□□□□□ -1.44
PCNAP12004 OR13K1P-201ENST00000444577 975 ntBASIC6.08□□□□□ -1.44
PCNAP12004 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.08□□□□□ -1.44
PCNAP12004 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.08□□□□□ -1.44
PCNAP12004 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 GM2AP2-201ENST00000491764 562 ntBASIC6.08□□□□□ -1.44
PCNAP12004 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.08□□□□□ -1.44
PCNAP12004 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.08□□□□□ -1.44
PCNAP12004 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PCNAP12004 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.08□□□□□ -1.44
PCNAP12004 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.08□□□□□ -1.44
PCNAP12004 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PCNAP12004 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.08□□□□□ -1.44
PCNAP12004 AC025283.1-201ENST00000572039 734 ntBASIC6.08□□□□□ -1.44
PCNAP12004 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.08□□□□□ -1.44
PCNAP12004 AL589863.1-201ENST00000595383 631 ntBASIC6.08□□□□□ -1.44
PCNAP12004 OR7M1P-201ENST00000608946 533 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms