Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.1□□□□□ -1.27
TOP1P11387 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TOP1P11387 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TOP1P11387 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TOP1P11387 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TOP1P11387 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TOP1P11387 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TOP1P11387 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
TOP1P11387 VN1R3-201ENST00000418822 919 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AC007562.1-201ENST00000421819 517 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AC245884.2-201ENST00000426257 404 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.1□□□□□ -1.27
TOP1P11387 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.1□□□□□ -1.27
TOP1P11387 AC023274.2-201ENST00000445264 521 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AC016027.4-201ENST00000450866 277 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AC112187.1-201ENST00000455837 479 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AL022319.1-201ENST00000458183 1167 ntBASIC7.1□□□□□ -1.27
TOP1P11387 SLC25A51P1-201ENST00000468432 871 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AC094085.1-201ENST00000468914 584 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AC114728.1-201ENST00000488289 483 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.1□□□□□ -1.27
TOP1P11387 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.1□□□□□ -1.27
TOP1P11387 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.1□□□□□ -1.27
TOP1P11387 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.1□□□□□ -1.27
TOP1P11387 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.1□□□□□ -1.27
TOP1P11387 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.1□□□□□ -1.27
TOP1P11387 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.1□□□□□ -1.27
TOP1P11387 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.1□□□□□ -1.27
TOP1P11387 AC129778.1-202ENST00000623812 261 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AL591379.1-207ENST00000635982 261 ntBASIC7.1□□□□□ -1.27
TOP1P11387 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.1□□□□□ -1.27
TOP1P11387 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TOP1P11387 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TOP1P11387 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TOP1P11387 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TOP1P11387 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TOP1P11387 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TOP1P11387 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TOP1P11387 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TOP1P11387 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TOP1P11387 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TOP1P11387 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.09□□□□□ -1.27
TOP1P11387 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
TOP1P11387 GNL2P1-201ENST00000451274 2190 ntBASIC7.09□□□□□ -1.27
TOP1P11387 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.09□□□□□ -1.27
TOP1P11387 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.09□□□□□ -1.27
TOP1P11387 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.09□□□□□ -1.27
TOP1P11387 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.09□□□□□ -1.27
TOP1P11387 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.09□□□□□ -1.27
TOP1P11387 AL449283.1-201ENST00000602631 3403 ntBASIC7.09□□□□□ -1.27
TOP1P11387 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
TOP1P11387 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TOP1P11387 RNA5SP477-201ENST00000362639 119 ntBASIC7.09□□□□□ -1.27
TOP1P11387 RN7SKP15-201ENST00000364742 309 ntBASIC7.09□□□□□ -1.27
TOP1P11387 SUGT1P2-201ENST00000379452 992 ntBASIC7.09□□□□□ -1.27
TOP1P11387 AC079807.1-201ENST00000429993 481 ntBASIC7.09□□□□□ -1.27
TOP1P11387 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.09□□□□□ -1.27
TOP1P11387 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
TOP1P11387 AL445466.1-201ENST00000448432 357 ntBASIC7.09□□□□□ -1.27
TOP1P11387 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.09□□□□□ -1.27
TOP1P11387 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.09□□□□□ -1.27
TOP1P11387 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.09□□□□□ -1.27
TOP1P11387 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.09□□□□□ -1.27
TOP1P11387 AC060775.1-201ENST00000518241 520 ntBASIC7.09□□□□□ -1.27
TOP1P11387 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.09□□□□□ -1.27
TOP1P11387 OR56A7P-201ENST00000524865 941 ntBASIC7.09□□□□□ -1.27
TOP1P11387 NANOGNBP2-201ENST00000544753 553 ntBASIC7.09□□□□□ -1.27
TOP1P11387 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.09□□□□□ -1.27
TOP1P11387 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.09□□□□□ -1.27
TOP1P11387 AC005244.1-201ENST00000582566 339 ntBASIC7.09□□□□□ -1.27
TOP1P11387 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.09□□□□□ -1.27
TOP1P11387 AL352984.2-201ENST00000611153 546 ntBASIC7.09□□□□□ -1.27
TOP1P11387 MIR6809-201ENST00000612189 116 ntBASIC7.09□□□□□ -1.27
TOP1P11387 FO681491.1-202ENST00000623392 737 ntBASIC7.09□□□□□ -1.27
TOP1P11387 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.09□□□□□ -1.27
TOP1P11387 AC063952.1-203ENST00000634410 658 ntBASIC7.09□□□□□ -1.27
TOP1P11387 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TOP1P11387 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TOP1P11387 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TOP1P11387 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
TOP1P11387 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.09□□□□□ -1.28
TOP1P11387 MTND5P12-201ENST00000502851 1449 ntBASIC7.09□□□□□ -1.28
TOP1P11387 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
TOP1P11387 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.08□□□□□ -1.28
TOP1P11387 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TOP1P11387 AC092724.1-201ENST00000624623 3397 ntBASIC7.08□□□□□ -1.28
TOP1P11387 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.08□□□□□ -1.28
TOP1P11387 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
TOP1P11387 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.08□□□□□ -1.28
TOP1P11387 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
TOP1P11387 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.08□□□□□ -1.28
TOP1P11387 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TOP1P11387 RNA5SP273-201ENST00000362484 113 ntBASIC7.08□□□□□ -1.28
TOP1P11387 RPL35AP3-201ENST00000414680 288 ntBASIC7.08□□□□□ -1.28
TOP1P11387 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.08□□□□□ -1.28
TOP1P11387 GAPDHP75-201ENST00000433910 943 ntBASIC7.08□□□□□ -1.28
TOP1P11387 AC079922.1-201ENST00000443291 359 ntBASIC7.08□□□□□ -1.28
TOP1P11387 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TOP1P11387 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.08□□□□□ -1.28
TOP1P11387 OR5H7P-201ENST00000514084 930 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms