Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL109924.4-201ENST00000623089 670 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.64□□□□□ -1.51
MT-ND1P03886 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
MT-ND1P03886 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.64□□□□□ -1.51
MT-ND1P03886 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.64□□□□□ -1.51
MT-ND1P03886 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.64□□□□□ -1.51
MT-ND1P03886 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
MT-ND1P03886 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.64□□□□□ -1.51
MT-ND1P03886 AC217777.1-201ENST00000570034 1471 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
MT-ND1P03886 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.63□□□□□ -1.51
MT-ND1P03886 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
MT-ND1P03886 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC020656.2-201ENST00000613291 5309 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
MT-ND1P03886 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
MT-ND1P03886 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
MT-ND1P03886 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 RNA5SP346-201ENST00000363541 121 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 RN7SKP257-201ENST00000364525 309 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 RNA5SP485-201ENST00000365053 119 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC003045.1-201ENST00000398779 713 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.63□□□□□ -1.51
MT-ND1P03886 CBX1P3-201ENST00000413296 527 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 AL360013.1-201ENST00000419031 858 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC112492.2-201ENST00000432774 1030 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 PPIAP10-201ENST00000438675 458 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.63□□□□□ -1.51
MT-ND1P03886 POU5F1P5-201ENST00000445059 658 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 COX4I1P2-201ENST00000447446 547 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.63□□□□□ -1.51
MT-ND1P03886 RPL12P39-201ENST00000455456 496 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.63□□□□□ -1.51
MT-ND1P03886 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC015524.1-201ENST00000491585 472 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC018639.1-201ENST00000492994 442 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.63□□□□□ -1.51
MT-ND1P03886 OR4D12P-201ENST00000509361 911 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.63□□□□□ -1.51
MT-ND1P03886 RNA5SP96-201ENST00000516041 107 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 RNA5SP206-201ENST00000516703 121 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.63□□□□□ -1.51
MT-ND1P03886 CYCSP25-201ENST00000525280 316 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 AC135983.3-201ENST00000528049 1226 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC025283.1-201ENST00000572039 734 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 AC024267.2-201ENST00000582737 417 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 AC060780.2-201ENST00000589047 198 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.63□□□□□ -1.51
MT-ND1P03886 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.63□□□□□ -1.51
MT-ND1P03886 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.63□□□□□ -1.51
MT-ND1P03886 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.63□□□□□ -1.51
MT-ND1P03886 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC016745.2-201ENST00000608834 3443 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.63□□□□□ -1.51
MT-ND1P03886 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.63□□□□□ -1.51
MT-ND1P03886 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 AC083837.1-201ENST00000565297 2994 ntBASIC5.63□□□□□ -1.51
MT-ND1P03886 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MT-ND1P03886 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
MT-ND1P03886 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 PARP4P2-201ENST00000446672 3326 ntBASIC5.62□□□□□ -1.51
MT-ND1P03886 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.62□□□□□ -1.51
MT-ND1P03886 RNU6-167P-201ENST00000384292 106 ntBASIC5.62□□□□□ -1.51
MT-ND1P03886 AC245096.1-201ENST00000413104 546 ntBASIC5.62□□□□□ -1.51
MT-ND1P03886 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.62□□□□□ -1.51
MT-ND1P03886 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.62□□□□□ -1.51
MT-ND1P03886 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.62□□□□□ -1.51
MT-ND1P03886 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MT-ND1P03886 AC128677.1-201ENST00000436016 442 ntBASIC5.62□□□□□ -1.51
MT-ND1P03886 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms