Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC123769.1-201ENST00000530992 3192 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC022164.1-201ENST00000568767 2673 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 RPL11P4-201ENST00000332269 436 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AL157702.1-201ENST00000398764 426 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 RN7SKP121-201ENST00000410842 305 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 MTND2P12-201ENST00000417560 1252 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 FTLP19-201ENST00000433300 394 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 DNAJC19P5-201ENST00000443295 316 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 POU5F1P5-201ENST00000445059 658 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 snoU13.29-201ENST00000459370 104 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 EIF4E2P2-201ENST00000492033 736 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 OR4D12P-201ENST00000509361 911 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC138517.1-201ENST00000515724 568 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 RN7SKP5-201ENST00000517045 272 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AL591167.1-201ENST00000607321 456 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC010998.3-201ENST00000613871 631 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC069234.4-201ENST00000621276 412 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AL122023.1-201ENST00000622847 530 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC007603.3-201ENST00000636915 979 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 OR7A1P-202ENST00000641542 1158 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC004656.1-201ENST00000568479 4951 ntBASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AL133243.2-201ENST00000610331 1621 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AC112255.1-201ENST00000624070 2493 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AC092111.2-201ENST00000611627 1414 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 SNORA43.1-201ENST00000364863 140 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 MIR551B-201ENST00000384984 96 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 PRELID1P1-201ENST00000403549 660 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AL096800.1-201ENST00000405326 893 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AL365220.1-201ENST00000432923 399 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AL731534.1-201ENST00000434711 269 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 ARMC4P1-201ENST00000438905 707 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AC064862.5-201ENST00000440618 334 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 RPL12P49-201ENST00000441100 121 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 CXCR2P1-202ENST00000443392 1074 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 CYCSP51-201ENST00000443545 318 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 RPS18P1-201ENST00000447840 458 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AL133351.3-201ENST00000454998 193 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AC099670.1-201ENST00000455141 783 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AC117500.1-201ENST00000497352 755 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms