Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU6-564P-201ENST00000410983 104 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 H3F3BP1-201ENST00000440551 403 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 IGLV3-6-201ENST00000523937 250 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC138701.1-201ENST00000524329 714 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC135983.3-201ENST00000528049 1226 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 OR52K3P-201ENST00000531655 943 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC121758.1-202ENST00000556917 658 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC012414.2-201ENST00000559474 187 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 BNIP3P31-201ENST00000604515 566 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC009269.6-201ENST00000621778 588 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC097520.1-201ENST00000624435 385 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 LINC02495-203ENST00000636704 242 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC010325.3-201ENST00000641084 394 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 AC023245.2-201ENST00000530760 2978 ntBASIC6.54□□□□□ -1.36
DKK3Q9UBP4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DKK3Q9UBP4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AC009779.8-201ENST00000641684 4384 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 U3.23-201ENST00000391132 200 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AL139039.2-201ENST00000407436 479 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AL512504.1-201ENST00000415494 778 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 RPL21P50-201ENST00000417698 477 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 MTATP6P17-201ENST00000431030 672 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 GTF3AP6-201ENST00000432585 986 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 MED28P4-201ENST00000433137 572 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 RPS10P18-201ENST00000442662 495 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 OR2AF1P-201ENST00000454899 889 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 FCF1P6-201ENST00000456841 595 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 SEPT7P6-201ENST00000469999 1143 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 SNRPCP3-201ENST00000474888 476 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AC016550.1-201ENST00000505348 785 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AC025768.1-201ENST00000510057 267 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 OR10D4P-201ENST00000525892 951 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 OR4A41P-201ENST00000533053 928 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AL953862.2-201ENST00000603089 820 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AP001002.1-201ENST00000625148 1513 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AC009120.2-204ENST00000621548 2032 ntBASIC6.53□□□□□ -1.36
DKK3Q9UBP4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
DKK3Q9UBP4 AC010624.4-201ENST00000597606 1351 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms