Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 MIR6809-201ENST00000612189 116 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AC096861.1-201ENST00000616652 240 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AC096708.4-201ENST00000620563 552 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AL357562.1-201ENST00000624911 609 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 AL121839.2-201ENST00000565058 6943 ntBASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.43□□□□□ -1.54
CLCF1Q9UBD9 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC096921.2-201ENST00000561507 1916 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC023490.2-201ENST00000359859 470 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 RNU105B-201ENST00000364478 208 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC010740.1-201ENST00000417035 684 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 RPS3P2-201ENST00000421346 701 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 IPPKP1-201ENST00000422501 768 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 CDY8P-201ENST00000428380 1279 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AL355355.1-201ENST00000442900 793 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 CDY20P-201ENST00000447528 1279 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AL445466.1-201ENST00000448432 357 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC016027.4-201ENST00000450866 277 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC073594.1-201ENST00000462065 364 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC005244.1-201ENST00000582566 339 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AL352984.2-201ENST00000611153 546 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 MIR6793-201ENST00000612376 63 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 SNX18P12-201ENST00000624821 759 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AC119674.1-202ENST00000641333 1860 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 GNL2P1-201ENST00000451274 2190 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 NR1H5P-201ENST00000452683 1377 ntBASIC5.42□□□□□ -1.54
CLCF1Q9UBD9 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AC009831.5-201ENST00000624000 3189 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 RNA5SP375-201ENST00000362975 119 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 SLC20A1P1-201ENST00000413906 956 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AL451063.1-201ENST00000450164 1133 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 RN7SL165P-201ENST00000477476 291 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 AC114728.1-201ENST00000488289 483 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 RN7SL193P-201ENST00000491708 276 ntBASIC5.41□□□□□ -1.54
CLCF1Q9UBD9 UGT2A3P7-201ENST00000510485 734 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms