Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 Y_RNA.695-201ENST00000516715 107 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 SCARNA20.3-201ENST00000516913 131 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AP001804.1-201ENST00000526868 919 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 RBM7-208ENST00000545678 867 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 BLZF2P-201ENST00000553776 1130 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC074051.3-201ENST00000570238 358 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 OR5AH1P-201ENST00000595968 283 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AF131215.7-201ENST00000602443 707 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL109918.2-201ENST00000605188 279 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL356052.1-201ENST00000605764 376 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL139418.1-201ENST00000613613 177 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC026951.2-201ENST00000613847 241 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL731556.2-201ENST00000615610 770 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL359314.1-201ENST00000616913 261 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL359757.1-201ENST00000623176 255 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 ZNF663P-202ENST00000641770 1131 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC073342.2-201ENST00000595842 1800 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 TBCCD1-201ENST00000338733 2441 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 RNU1-16P-201ENST00000365477 164 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 FAM204BP-201ENST00000369171 701 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 RNU6-413P-201ENST00000384115 107 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 SNORA40.2-201ENST00000390847 128 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 HMGB3P1-201ENST00000393368 573 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 RN7SKP166-201ENST00000410812 305 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 MTCO2P34-201ENST00000421994 607 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC005189.1-201ENST00000431286 310 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AL671855.1-201ENST00000446875 1203 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 CCNJP1-201ENST00000450600 1149 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 OR7E62P-201ENST00000456741 477 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 CST12P-201ENST00000457644 362 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC026348.1-201ENST00000462549 1053 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC112198.1-201ENST00000505369 1220 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 SEPT10P1-201ENST00000517342 1162 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC092375.1-201ENST00000550410 637 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC011611.5-201ENST00000552477 578 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC063923.2-201ENST00000562158 928 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC027104.1-201ENST00000563702 681 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC087481.2-201ENST00000565492 330 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC022239.4-201ENST00000602626 504 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AL392112.1-201ENST00000605115 829 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms