Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.46□□□□□ -1.54
HMG20AQ9NP66 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMG20AQ9NP66 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 U3.7-201ENST00000363668 216 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 RPL11P3-201ENST00000395256 523 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AL391419.1-201ENST00000398901 1275 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AL589794.1-201ENST00000424971 390 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 BMS1P11-201ENST00000442351 885 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 BMS1P9-201ENST00000457640 885 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 RN7SL352P-201ENST00000466002 277 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 FTH1P11-201ENST00000517577 551 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC020937.1-201ENST00000519677 1013 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC092718.4-201ENST00000566639 716 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 PPIAP14-201ENST00000577627 496 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 SETP3-201ENST00000581726 813 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 RPL7AP69-201ENST00000595306 806 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC006115.2-201ENST00000596823 202 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC012175.1-201ENST00000603755 531 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC006924.1-201ENST00000610750 559 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 MIR6085-201ENST00000618314 110 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC099654.15-201ENST00000639802 509 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC004023.1-201ENST00000561473 1744 ntBASIC5.45□□□□□ -1.54
HMG20AQ9NP66 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.45□□□□□ -1.54
HMG20AQ9NP66 AC018809.2-201ENST00000602436 3823 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 RNU1-5P-201ENST00000362684 144 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 RPL12P23-201ENST00000405880 490 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AL353133.1-201ENST00000407695 401 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 GPS2P1-201ENST00000411761 986 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC092646.1-201ENST00000427142 901 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 RPL36AP55-201ENST00000454114 305 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC079080.1-201ENST00000479841 822 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 MINOS1P4-201ENST00000515470 318 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC027229.1-201ENST00000583887 253 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 RPL29P33-201ENST00000587474 316 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 Z93930.3-201ENST00000607919 749 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 CDY3P-201ENST00000454543 1618 ntBASIC5.44□□□□□ -1.54
HMG20AQ9NP66 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.44□□□□□ -1.54
HMG20AQ9NP66 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms