Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC093166.4-201ENST00000457867 318 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 MTATP6P1-201ENST00000514057 681 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 SETP21-201ENST00000514799 892 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 IGLV3-30-201ENST00000524362 298 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AC010547.6-201ENST00000571789 193 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 TXNP4-201ENST00000575018 310 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 MIR132-201ENST00000591554 101 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 ZNF101P1-201ENST00000435701 1720 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 RNA5SP242-201ENST00000364171 118 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AL121835.1-201ENST00000404250 354 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 EEF1B2P8-201ENST00000414101 671 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 RPS12P17-201ENST00000438591 377 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AL161636.2-201ENST00000445179 927 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 FTLP8-201ENST00000446770 267 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 RPL31P15-201ENST00000449770 338 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 RN7SL269P-201ENST00000467795 305 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 RPL7P51-201ENST00000490532 749 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 RNA5SP271-201ENST00000516700 88 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AC135626.1-201ENST00000556983 435 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AC145423.1-201ENST00000605712 336 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AC068769.1-201ENST00000474767 2426 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 MTCO1P11-201ENST00000429111 1528 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 DNM1P47-203ENST00000571780 12667 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 FUNDC2P3-201ENST00000334716 533 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 RN7SKP206-201ENST00000410823 293 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 RPS15AP30-201ENST00000420976 390 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC015983.1-201ENST00000441577 373 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 ACA64.4-201ENST00000459070 127 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 RPSAP37-201ENST00000470913 821 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 SNORA81.2-201ENST00000516868 170 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AP000648.1-201ENST00000529682 397 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC125612.1-201ENST00000547580 377 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AL031601.1-201ENST00000605702 394 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AL021918.2-201ENST00000613415 194 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC114876.1-201ENST00000490962 1366 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 MAPK10-338ENST00000641647 3362 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 TTC41P-205ENST00000551270 3963 ntBASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KIAA1549Q9HCM3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms