Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM55Q9BYV6 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
TRIM55Q9BYV6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM55Q9BYV6 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM55Q9BYV6 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
TRIM55Q9BYV6 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM55Q9BYV6 AC006116.1-201ENST00000587908 2171 ntBASIC7.08□□□□□ -1.28
TRIM55Q9BYV6 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM55Q9BYV6 MT-RNR2-201ENST00000387347 1559 ntBASIC7.08□□□□□ -1.28
TRIM55Q9BYV6 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC010168.2-201ENST00000562691 5428 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 OR52B5P-204ENST00000641744 3467 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 RNA5SP260-201ENST00000363849 111 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 ATP5F1P2-201ENST00000398143 760 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 DNAJC19P6-201ENST00000401853 280 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 RN7SKP225-201ENST00000410405 352 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL513175.2-201ENST00000422071 443 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 PRUNEP1-201ENST00000425846 705 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 RPS6P15-201ENST00000431996 751 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC084290.1-201ENST00000434995 374 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL592114.2-201ENST00000440142 532 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL589880.1-201ENST00000448271 287 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 PRDX1P1-201ENST00000449329 596 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 PSPC1P2-201ENST00000455130 225 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL928654.1-201ENST00000476081 354 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 RPL5P23-201ENST00000496040 868 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 FAM30C-201ENST00000561158 410 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 VN1R78P-201ENST00000597393 564 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC097376.1-201ENST00000602907 997 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL683813.2-201ENST00000605245 502 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL136139.1-201ENST00000605568 222 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 FAM72A-208ENST00000607379 1139 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AL139123.1-201ENST00000612008 430 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 FRG1HP-204ENST00000617940 757 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 U6.48-201ENST00000618523 106 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC010975.3-201ENST00000618727 978 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC112694.2-201ENST00000623697 768 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AP002967.1-201ENST00000624203 539 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 BX649567.1-201ENST00000642071 1134 ntBASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM55Q9BYV6 AC090181.3-201ENST00000624777 1514 ntBASIC7.06□□□□□ -1.28
TRIM55Q9BYV6 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
TRIM55Q9BYV6 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.06□□□□□ -1.28
TRIM55Q9BYV6 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM55Q9BYV6 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
TRIM55Q9BYV6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.06□□□□□ -1.28
TRIM55Q9BYV6 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM55Q9BYV6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
TRIM55Q9BYV6 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.06□□□□□ -1.28
TRIM55Q9BYV6 RNU6-224P-201ENST00000384055 107 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms