Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AP006248.3-201ENST00000623580 594 ntBASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 AC092184.1-201ENST00000625042 715 ntBASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 AC010325.3-201ENST00000641084 394 ntBASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 AC007406.5-201ENST00000570140 3170 ntBASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 AC023245.2-201ENST00000530760 2978 ntBASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP1Q96SZ6 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC025809.2-201ENST00000625085 1802 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 OR2M1P-201ENST00000318104 951 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 RNA5SP512-201ENST00000364550 120 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 RNU6-1000P-201ENST00000391066 106 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AL590623.1-201ENST00000427864 105 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AL591719.1-201ENST00000444669 744 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 MTND1P1-201ENST00000445453 368 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 RPS27P20-201ENST00000492051 246 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AL117692.1-201ENST00000494283 713 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC063943.2-201ENST00000495697 534 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC018645.1-201ENST00000505003 109 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC093816.1-201ENST00000515076 913 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 RNA5SP116-201ENST00000516132 98 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 OR4A41P-201ENST00000533053 928 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 MIR5095-201ENST00000578844 88 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 MTCO2P2-201ENST00000591258 225 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AL589863.1-201ENST00000595383 631 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC069304.3-201ENST00000603938 1084 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC012368.3-201ENST00000604190 219 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC012676.3-201ENST00000614983 479 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AP001264.1-201ENST00000620602 703 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC006453.5-201ENST00000636451 619 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AL596244.1-201ENST00000567068 3779 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 AC005034.3-201ENST00000604845 1747 ntBASIC6.79□□□□□ -1.32
CDK5RAP1Q96SZ6 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 CR788268.1-201ENST00000603931 1809 ntBASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP1Q96SZ6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms