Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.48□□□□□ -1.53
RFT1Q96AA3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.48□□□□□ -1.53
RFT1Q96AA3 AC002069.2-201ENST00000603580 883 ntBASIC5.48□□□□□ -1.53
RFT1Q96AA3 AL008723.3-201ENST00000608926 449 ntBASIC5.48□□□□□ -1.53
RFT1Q96AA3 MIR6085-201ENST00000618314 110 ntBASIC5.48□□□□□ -1.53
RFT1Q96AA3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
RFT1Q96AA3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.48□□□□□ -1.53
RFT1Q96AA3 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.48□□□□□ -1.53
RFT1Q96AA3 MAPK10-350ENST00000641777 965 ntBASIC5.48□□□□□ -1.53
RFT1Q96AA3 OR7E91P-202ENST00000642062 1198 ntBASIC5.48□□□□□ -1.53
RFT1Q96AA3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFT1Q96AA3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFT1Q96AA3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFT1Q96AA3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFT1Q96AA3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFT1Q96AA3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RFT1Q96AA3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFT1Q96AA3 AC004023.1-201ENST00000561473 1744 ntBASIC5.48□□□□□ -1.53
RFT1Q96AA3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFT1Q96AA3 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFT1Q96AA3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.48□□□□□ -1.53
RFT1Q96AA3 RBPJP6-201ENST00000411556 1431 ntBASIC5.48□□□□□ -1.53
RFT1Q96AA3 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFT1Q96AA3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFT1Q96AA3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC096921.2-201ENST00000561507 1916 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 SNORD35A-201ENST00000363389 86 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC074375.1-201ENST00000372993 192 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AL391419.1-201ENST00000398901 1275 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 RN7SKP281-201ENST00000410472 352 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 OR52N3P-201ENST00000413417 934 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC009506.2-201ENST00000420635 840 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 PTPN2P1-201ENST00000423212 1072 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 E2F6P1-201ENST00000428850 745 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 KRT8P51-201ENST00000438938 274 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 E2F6P3-201ENST00000441743 743 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC009244.1-201ENST00000450566 258 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC022080.2-201ENST00000452932 533 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 RN7SL72P-201ENST00000460697 269 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 MTND3P6-201ENST00000485242 339 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC106800.3-201ENST00000511389 308 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC130366.1-201ENST00000526505 1192 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC103855.4-201ENST00000533158 265 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC026956.1-201ENST00000558741 396 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC100832.2-201ENST00000582080 776 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 RPL29P33-201ENST00000587474 316 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC079791.1-201ENST00000605356 973 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 AC004890.3-201ENST00000605566 1095 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 BCORP1-203ENST00000513194 5093 ntBASIC5.47□□□□□ -1.53
RFT1Q96AA3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFT1Q96AA3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RFT1Q96AA3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RFT1Q96AA3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.46□□□□□ -1.53
RFT1Q96AA3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms