Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.64□□□□□ -1.51
SHFQ7M4L6 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHFQ7M4L6 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHFQ7M4L6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHFQ7M4L6 HDAC1P2-201ENST00000453661 1398 ntBASIC5.64□□□□□ -1.51
SHFQ7M4L6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHFQ7M4L6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHFQ7M4L6 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SHFQ7M4L6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.64□□□□□ -1.51
SHFQ7M4L6 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHFQ7M4L6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHFQ7M4L6 AC025470.1-201ENST00000510053 2032 ntBASIC5.64□□□□□ -1.51
SHFQ7M4L6 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC009220.2-201ENST00000489759 1751 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 CUL4AP1-201ENST00000514750 1863 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 GNG5P2-201ENST00000372054 207 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 U3.23-201ENST00000391132 200 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AL121835.1-201ENST00000404250 354 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 MRPL32P1-201ENST00000406301 247 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AL139100.1-201ENST00000408001 498 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 E2F6P1-201ENST00000428850 745 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 E2F6P3-201ENST00000441743 743 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AL158214.1-201ENST00000444423 404 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 VN1R48P-201ENST00000448149 1036 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 EIF3LP2-201ENST00000457262 807 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 RN7SL372P-201ENST00000461982 298 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 RPL7AP30-201ENST00000482859 796 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC008945.1-201ENST00000505144 499 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC025768.1-201ENST00000510057 267 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC130366.1-201ENST00000526505 1192 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC103855.4-201ENST00000533158 265 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC134349.2-201ENST00000535136 910 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC005000.1-201ENST00000536192 288 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC026956.1-201ENST00000558741 396 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 SYPL1P2-201ENST00000582878 727 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC084036.1-201ENST00000609190 508 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AL356752.1-201ENST00000615844 593 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AC003992.1-201ENST00000635364 557 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 AL590396.2-201ENST00000636511 1041 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHFQ7M4L6 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.63□□□□□ -1.51
SHFQ7M4L6 AP001002.1-201ENST00000625148 1513 ntBASIC5.63□□□□□ -1.51
SHFQ7M4L6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 OR7A2P-201ENST00000304105 930 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC026310.1-201ENST00000396004 378 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AL445238.1-204ENST00000400311 463 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 RN7SKP151-201ENST00000410230 316 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 PTPN2P1-201ENST00000423212 1072 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AC016027.5-201ENST00000427227 210 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 HSFY7P-201ENST00000432672 318 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHFQ7M4L6 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 HSFY8P-201ENST00000437934 318 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 RPS10P14-201ENST00000440748 502 ntBASIC5.62□□□□□ -1.51
SHFQ7M4L6 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.62□□□□□ -1.51
SHFQ7M4L6 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms