Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.59□□□□□ -1.67
CCL20P78556 RNA5SP418-201ENST00000515951 117 ntBASIC4.59□□□□□ -1.67
CCL20P78556 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.59□□□□□ -1.67
CCL20P78556 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.59□□□□□ -1.67
CCL20P78556 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.59□□□□□ -1.67
CCL20P78556 GTF2IP11-201ENST00000526931 420 ntBASIC4.59□□□□□ -1.67
CCL20P78556 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.59□□□□□ -1.67
CCL20P78556 AC006206.1-201ENST00000544842 3387 ntBASIC4.59□□□□□ -1.67
CCL20P78556 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.59□□□□□ -1.67
CCL20P78556 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC4.59□□□□□ -1.67
CCL20P78556 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CCL20P78556 AL132640.2-202ENST00000559732 614 ntBASIC4.59□□□□□ -1.67
CCL20P78556 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.59□□□□□ -1.67
CCL20P78556 RPL29P33-201ENST00000587474 316 ntBASIC4.59□□□□□ -1.67
CCL20P78556 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC4.59□□□□□ -1.67
CCL20P78556 AC099777.1-201ENST00000603779 1070 ntBASIC4.59□□□□□ -1.67
CCL20P78556 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCL20P78556 SNORA74.4-201ENST00000607595 199 ntBASIC4.59□□□□□ -1.67
CCL20P78556 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.59□□□□□ -1.67
CCL20P78556 OR51C1P-201ENST00000608504 942 ntBASIC4.59□□□□□ -1.67
CCL20P78556 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.59□□□□□ -1.67
CCL20P78556 AC026367.3-201ENST00000619032 590 ntBASIC4.59□□□□□ -1.67
CCL20P78556 AL603750.1-201ENST00000624216 1717 ntBASIC4.59□□□□□ -1.67
CCL20P78556 AC073488.6-201ENST00000632293 754 ntBASIC4.59□□□□□ -1.67
CCL20P78556 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCL20P78556 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCL20P78556 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCL20P78556 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CCL20P78556 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.59□□□□□ -1.68
CCL20P78556 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 AC011755.1-201ENST00000623763 2049 ntBASIC4.58□□□□□ -1.68
CCL20P78556 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCL20P78556 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 RNA5SP211-201ENST00000365516 117 ntBASIC4.58□□□□□ -1.68
CCL20P78556 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCL20P78556 U3.28-201ENST00000391249 210 ntBASIC4.58□□□□□ -1.68
CCL20P78556 NPM1P38-201ENST00000403835 865 ntBASIC4.58□□□□□ -1.68
CCL20P78556 RPSAP44-201ENST00000406712 884 ntBASIC4.58□□□□□ -1.68
CCL20P78556 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.58□□□□□ -1.68
CCL20P78556 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.58□□□□□ -1.68
CCL20P78556 RPL18AP14-201ENST00000417685 526 ntBASIC4.58□□□□□ -1.68
CCL20P78556 RNGTTP1-201ENST00000420965 728 ntBASIC4.58□□□□□ -1.68
CCL20P78556 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.58□□□□□ -1.68
CCL20P78556 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 KRT18P53-201ENST00000431919 117 ntBASIC4.58□□□□□ -1.68
CCL20P78556 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.58□□□□□ -1.68
CCL20P78556 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC4.58□□□□□ -1.68
CCL20P78556 NDUFB4P8-201ENST00000435351 367 ntBASIC4.58□□□□□ -1.68
CCL20P78556 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 RPS12P17-201ENST00000438591 377 ntBASIC4.58□□□□□ -1.68
CCL20P78556 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 AC004129.2-201ENST00000457229 287 ntBASIC4.58□□□□□ -1.68
CCL20P78556 RN7SL456P-201ENST00000469290 295 ntBASIC4.58□□□□□ -1.68
CCL20P78556 AC018475.1-201ENST00000478358 465 ntBASIC4.58□□□□□ -1.68
CCL20P78556 RPL12P31-201ENST00000478433 450 ntBASIC4.58□□□□□ -1.68
CCL20P78556 RN7SL868P-201ENST00000485915 303 ntBASIC4.58□□□□□ -1.68
CCL20P78556 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC4.58□□□□□ -1.68
CCL20P78556 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.58□□□□□ -1.68
CCL20P78556 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.58□□□□□ -1.68
CCL20P78556 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 DCN-215ENST00000550099 719 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 RPL3P13-201ENST00000550415 216 ntBASIC4.58□□□□□ -1.68
CCL20P78556 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCL20P78556 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 MIR5705-201ENST00000579870 89 ntBASIC4.58□□□□□ -1.68
CCL20P78556 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.58□□□□□ -1.68
CCL20P78556 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 AC010320.5-201ENST00000619124 676 ntBASIC4.58□□□□□ -1.68
CCL20P78556 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 AC007347.2-201ENST00000623044 180 ntBASIC4.58□□□□□ -1.68
CCL20P78556 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 AC013489.3-201ENST00000623274 517 ntBASIC4.58□□□□□ -1.68
CCL20P78556 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms