Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RN7SL311P-201ENST00000579858 306 ntBASIC4.31□□□□□ -1.72
CKS1BP61024 MIR3187-201ENST00000583431 70 ntBASIC4.31□□□□□ -1.72
CKS1BP61024 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC4.31□□□□□ -1.72
CKS1BP61024 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC4.31□□□□□ -1.72
CKS1BP61024 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.31□□□□□ -1.72
CKS1BP61024 AC116165.3-201ENST00000614524 400 ntBASIC4.31□□□□□ -1.72
CKS1BP61024 KDM5DP1-201ENST00000622542 298 ntBASIC4.31□□□□□ -1.72
CKS1BP61024 AC006328.2-201ENST00000623198 397 ntBASIC4.31□□□□□ -1.72
CKS1BP61024 AC012005.2-201ENST00000624333 397 ntBASIC4.31□□□□□ -1.72
CKS1BP61024 AC005858.3-201ENST00000624756 589 ntBASIC4.31□□□□□ -1.72
CKS1BP61024 MUC2-202ENST00000613187 4845 ntBASIC4.31□□□□□ -1.72
CKS1BP61024 AC114774.1-201ENST00000507410 1770 ntBASIC4.31□□□□□ -1.72
CKS1BP61024 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CKS1BP61024 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.31□□□□□ -1.72
CKS1BP61024 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CKS1BP61024 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.31□□□□□ -1.72
CKS1BP61024 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CKS1BP61024 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CKS1BP61024 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.31□□□□□ -1.72
CKS1BP61024 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CKS1BP61024 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CKS1BP61024 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CKS1BP61024 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.31□□□□□ -1.72
CKS1BP61024 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CKS1BP61024 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CKS1BP61024 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC4.3□□□□□ -1.72
CKS1BP61024 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.3□□□□□ -1.72
CKS1BP61024 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC4.3□□□□□ -1.72
CKS1BP61024 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CKS1BP61024 RNA5SP321-201ENST00000362722 111 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 RN7SKP224-201ENST00000364140 325 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 SNORA68.2-201ENST00000391263 128 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.3□□□□□ -1.72
CKS1BP61024 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 AL662791.3-201ENST00000413771 776 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.3□□□□□ -1.72
CKS1BP61024 AC091492.1-201ENST00000419844 272 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 RBMY2JP-201ENST00000425544 1059 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.3□□□□□ -1.72
CKS1BP61024 OR6R1P-201ENST00000431838 940 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 RPL14P5-201ENST00000436474 730 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.3□□□□□ -1.72
CKS1BP61024 RPS10P18-201ENST00000442662 495 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC4.3□□□□□ -1.72
CKS1BP61024 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC4.3□□□□□ -1.72
CKS1BP61024 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 NIP7P2-201ENST00000485801 544 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC4.3□□□□□ -1.72
CKS1BP61024 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.3□□□□□ -1.72
CKS1BP61024 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CKS1BP61024 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.3□□□□□ -1.72
CKS1BP61024 AC111000.6-201ENST00000514471 709 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.3□□□□□ -1.72
CKS1BP61024 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.3□□□□□ -1.72
CKS1BP61024 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC4.3□□□□□ -1.72
CKS1BP61024 AC127381.1-201ENST00000555979 939 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.3□□□□□ -1.72
CKS1BP61024 AC018552.1-201ENST00000562099 811 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.3□□□□□ -1.72
CKS1BP61024 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.3□□□□□ -1.72
CKS1BP61024 AP006587.6-201ENST00000582128 1091 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 WDR45BP1-201ENST00000583470 1029 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC4.3□□□□□ -1.72
CKS1BP61024 AL137072.1-201ENST00000603444 466 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC4.3□□□□□ -1.72
CKS1BP61024 AC012510.1-201ENST00000607946 759 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.3□□□□□ -1.72
CKS1BP61024 AL121782.1-201ENST00000611242 413 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CKS1BP61024 AL035425.4-201ENST00000624509 1063 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 AC104118.1-201ENST00000607625 1589 ntBASIC4.3□□□□□ -1.72
CKS1BP61024 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS1BP61024 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CKS1BP61024 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CKS1BP61024 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CKS1BP61024 AC022164.1-201ENST00000568767 2673 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 TRIM53CP-201ENST00000531490 1354 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms