Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
ACTBP60709 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ACTBP60709 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
ACTBP60709 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.25□□□□□ -1.57
ACTBP60709 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.25□□□□□ -1.57
ACTBP60709 RPL31P11-201ENST00000426558 1558 ntBASIC5.25□□□□□ -1.57
ACTBP60709 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
ACTBP60709 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.25□□□□□ -1.57
ACTBP60709 AC010894.1-201ENST00000313760 361 ntBASIC5.25□□□□□ -1.57
ACTBP60709 MIR133A2-201ENST00000347538 102 ntBASIC5.25□□□□□ -1.57
ACTBP60709 RNA5SP308-201ENST00000362532 115 ntBASIC5.25□□□□□ -1.57
ACTBP60709 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.25□□□□□ -1.57
ACTBP60709 U3.52-201ENST00000384034 216 ntBASIC5.25□□□□□ -1.57
ACTBP60709 SNORA7A-201ENST00000384765 139 ntBASIC5.25□□□□□ -1.57
ACTBP60709 RN7SKP281-201ENST00000410472 352 ntBASIC5.25□□□□□ -1.57
ACTBP60709 AL158827.1-201ENST00000416300 391 ntBASIC5.25□□□□□ -1.57
ACTBP60709 AC006509.1-201ENST00000420788 634 ntBASIC5.25□□□□□ -1.57
ACTBP60709 BX276092.6-201ENST00000430476 250 ntBASIC5.25□□□□□ -1.57
ACTBP60709 RPL12P18-201ENST00000437175 325 ntBASIC5.25□□□□□ -1.57
ACTBP60709 RPS19P6-201ENST00000441327 433 ntBASIC5.25□□□□□ -1.57
ACTBP60709 AC234771.4-201ENST00000441416 730 ntBASIC5.25□□□□□ -1.57
ACTBP60709 HMGN1P32-201ENST00000441744 256 ntBASIC5.25□□□□□ -1.57
ACTBP60709 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.25□□□□□ -1.57
ACTBP60709 MORF4-201ENST00000447135 971 ntBASIC5.25□□□□□ -1.57
ACTBP60709 RPL31P11-202ENST00000454082 372 ntBASIC5.25□□□□□ -1.57
ACTBP60709 BX276092.8-201ENST00000455722 250 ntBASIC5.25□□□□□ -1.57
ACTBP60709 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.25□□□□□ -1.57
ACTBP60709 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.25□□□□□ -1.57
ACTBP60709 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.25□□□□□ -1.57
ACTBP60709 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.25□□□□□ -1.57
ACTBP60709 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.25□□□□□ -1.57
ACTBP60709 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.25□□□□□ -1.57
ACTBP60709 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.25□□□□□ -1.57
ACTBP60709 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 AC060780.2-201ENST00000589047 198 ntBASIC5.25□□□□□ -1.57
ACTBP60709 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.25□□□□□ -1.57
ACTBP60709 AC036176.3-201ENST00000602456 418 ntBASIC5.25□□□□□ -1.57
ACTBP60709 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.25□□□□□ -1.57
ACTBP60709 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.25□□□□□ -1.57
ACTBP60709 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 AL353743.3-201ENST00000442109 1468 ntBASIC5.25□□□□□ -1.57
ACTBP60709 AL353796.1-201ENST00000561542 3241 ntBASIC5.25□□□□□ -1.57
ACTBP60709 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.25□□□□□ -1.57
ACTBP60709 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 AC004076.2-201ENST00000620532 3323 ntBASIC5.25□□□□□ -1.57
ACTBP60709 AC138907.8-201ENST00000623981 2256 ntBASIC5.25□□□□□ -1.57
ACTBP60709 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ACTBP60709 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.24□□□□□ -1.57
ACTBP60709 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ACTBP60709 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ACTBP60709 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
ACTBP60709 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ACTBP60709 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ACTBP60709 AC016745.2-201ENST00000608834 3443 ntBASIC5.24□□□□□ -1.57
ACTBP60709 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ACTBP60709 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.24□□□□□ -1.57
ACTBP60709 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
ACTBP60709 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
ACTBP60709 VIM2P-201ENST00000402383 1294 ntBASIC5.24□□□□□ -1.57
ACTBP60709 MIR1266-201ENST00000408125 84 ntBASIC5.24□□□□□ -1.57
ACTBP60709 RNA5SP155-201ENST00000411154 129 ntBASIC5.24□□□□□ -1.57
ACTBP60709 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ACTBP60709 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.24□□□□□ -1.57
ACTBP60709 AL354766.1-201ENST00000423396 542 ntBASIC5.24□□□□□ -1.57
ACTBP60709 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.24□□□□□ -1.57
ACTBP60709 VTI1BP4-201ENST00000427516 527 ntBASIC5.24□□□□□ -1.57
ACTBP60709 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.24□□□□□ -1.57
ACTBP60709 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ACTBP60709 RPL23AP60-201ENST00000450011 454 ntBASIC5.24□□□□□ -1.57
ACTBP60709 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.24□□□□□ -1.57
ACTBP60709 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.24□□□□□ -1.57
ACTBP60709 AC073594.1-201ENST00000462065 364 ntBASIC5.24□□□□□ -1.57
ACTBP60709 AC063955.1-201ENST00000462872 685 ntBASIC5.24□□□□□ -1.57
ACTBP60709 AC022730.1-201ENST00000473114 568 ntBASIC5.24□□□□□ -1.57
ACTBP60709 AC124945.1-201ENST00000485133 188 ntBASIC5.24□□□□□ -1.57
ACTBP60709 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ACTBP60709 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.24□□□□□ -1.57
ACTBP60709 AC105420.1-201ENST00000504389 582 ntBASIC5.24□□□□□ -1.57
ACTBP60709 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.24□□□□□ -1.57
ACTBP60709 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.24□□□□□ -1.57
ACTBP60709 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ACTBP60709 TPM3P3-201ENST00000521343 354 ntBASIC5.24□□□□□ -1.57
ACTBP60709 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.24□□□□□ -1.57
ACTBP60709 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ACTBP60709 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.24□□□□□ -1.57
ACTBP60709 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.24□□□□□ -1.57
ACTBP60709 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.24□□□□□ -1.57
ACTBP60709 AC023968.1-201ENST00000560719 475 ntBASIC5.24□□□□□ -1.57
ACTBP60709 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.24□□□□□ -1.57
ACTBP60709 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.24□□□□□ -1.57
ACTBP60709 AC027796.1-201ENST00000575593 512 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms