Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 CXADRP3-202ENST00000617265 1100 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 MIR6811-201ENST00000620409 58 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 AOX3P-204ENST00000491025 2107 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 AL353763.1-201ENST00000624467 1628 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
HDAC4P56524 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HDAC4P56524 AC005225.5-201ENST00000623547 2225 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
HDAC4P56524 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HDAC4P56524 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HDAC4P56524 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HDAC4P56524 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HDAC4P56524 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.52□□□□□ -1.37
HDAC4P56524 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HDAC4P56524 CDY11P-201ENST00000447168 1651 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.52□□□□□ -1.37
HDAC4P56524 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
HDAC4P56524 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HDAC4P56524 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HDAC4P56524 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HDAC4P56524 RNA5SP251-201ENST00000410614 137 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 AC116036.1-201ENST00000412199 367 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.52□□□□□ -1.37
HDAC4P56524 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.52□□□□□ -1.37
HDAC4P56524 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.52□□□□□ -1.37
HDAC4P56524 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.52□□□□□ -1.37
HDAC4P56524 AC097523.2-201ENST00000435551 652 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 OR13K1P-201ENST00000444577 975 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 POU5F1P5-201ENST00000445059 658 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 AC097359.1-201ENST00000447946 463 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 OR52I1-201ENST00000450052 1050 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 AC016724.1-201ENST00000453215 421 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HDAC4P56524 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.52□□□□□ -1.37
HDAC4P56524 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.52□□□□□ -1.37
HDAC4P56524 RN7SL104P-201ENST00000498686 293 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 AP001960.1-201ENST00000506494 658 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.52□□□□□ -1.37
HDAC4P56524 MTND2P31-201ENST00000512602 616 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 RN7SKP183-201ENST00000517169 324 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.52□□□□□ -1.37
HDAC4P56524 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.52□□□□□ -1.37
HDAC4P56524 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.52□□□□□ -1.37
HDAC4P56524 RPA2P3-201ENST00000533268 770 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.52□□□□□ -1.37
HDAC4P56524 AP001858.2-201ENST00000536213 601 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.52□□□□□ -1.37
HDAC4P56524 AC234775.3-201ENST00000564612 656 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HDAC4P56524 MT1CP-201ENST00000567054 174 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 MIR4271-201ENST00000582451 67 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.52□□□□□ -1.37
HDAC4P56524 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.52□□□□□ -1.37
HDAC4P56524 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.52□□□□□ -1.37
HDAC4P56524 AP001153.1-201ENST00000641024 338 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 AC010325.3-201ENST00000641084 394 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.52□□□□□ -1.37
HDAC4P56524 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
HDAC4P56524 CASC19-255ENST00000641733 1385 ntBASIC6.52□□□□□ -1.37
HDAC4P56524 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HDAC4P56524 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
HDAC4P56524 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
HDAC4P56524 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.52□□□□□ -1.37
HDAC4P56524 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.51□□□□□ -1.37
HDAC4P56524 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HDAC4P56524 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HDAC4P56524 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 RN7SKP269-201ENST00000365545 319 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.51□□□□□ -1.37
HDAC4P56524 AC017078.1-201ENST00000416146 368 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 VN1R20P-201ENST00000425215 966 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 RPL34P27-201ENST00000428810 349 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 AC010086.1-201ENST00000437359 1052 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 AC016908.1-201ENST00000442571 1219 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.51□□□□□ -1.37
HDAC4P56524 RPL29P23-201ENST00000486188 442 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 OR2A3P-201ENST00000493774 953 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 AC106822.1-201ENST00000502647 526 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.51□□□□□ -1.37
HDAC4P56524 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 AC147055.1-201ENST00000509261 750 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.51□□□□□ -1.37
HDAC4P56524 SNORD116-30-201ENST00000516468 85 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 RNA5SP400-201ENST00000517155 111 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms