Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL15A1P39059 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
COL15A1P39059 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL15A1P39059 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
COL15A1P39059 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL15A1P39059 AP001541.1-201ENST00000623322 1904 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.67□□□□□ -1.18
COL15A1P39059 AC022034.1-201ENST00000512867 2156 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 TMEM75-201ENST00000624314 2165 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL15A1P39059 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL15A1P39059 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.67□□□□□ -1.18
COL15A1P39059 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.67□□□□□ -1.18
COL15A1P39059 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.67□□□□□ -1.18
COL15A1P39059 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.67□□□□□ -1.18
COL15A1P39059 AC073909.1-201ENST00000447112 999 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 AC110056.1-201ENST00000525759 911 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC7.67□□□□□ -1.18
COL15A1P39059 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL15A1P39059 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL15A1P39059 AC115989.2-201ENST00000578640 563 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 AP001496.3-201ENST00000580230 913 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.67□□□□□ -1.18
COL15A1P39059 AC067852.5-201ENST00000589299 310 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 AC011497.2-201ENST00000600255 639 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 AL049840.6-201ENST00000604583 345 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 AL161912.3-201ENST00000605404 628 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.67□□□□□ -1.18
COL15A1P39059 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL15A1P39059 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
COL15A1P39059 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
COL15A1P39059 AC016251.2-201ENST00000623393 3089 ntBASIC7.67□□□□□ -1.18
COL15A1P39059 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL15A1P39059 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
COL15A1P39059 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL15A1P39059 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.66□□□□□ -1.18
COL15A1P39059 AC061975.7-201ENST00000592016 2692 ntBASIC7.66□□□□□ -1.18
COL15A1P39059 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL15A1P39059 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL15A1P39059 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL15A1P39059 OR9K1P-201ENST00000326513 941 ntBASIC7.66□□□□□ -1.18
COL15A1P39059 SNORA64.1-201ENST00000362600 132 ntBASIC7.66□□□□□ -1.18
COL15A1P39059 AC016739.1-201ENST00000405359 345 ntBASIC7.66□□□□□ -1.18
COL15A1P39059 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.66□□□□□ -1.18
COL15A1P39059 AC002504.1-201ENST00000438281 691 ntBASIC7.66□□□□□ -1.18
COL15A1P39059 AC026348.1-201ENST00000462549 1053 ntBASIC7.66□□□□□ -1.18
COL15A1P39059 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC7.66□□□□□ -1.18
COL15A1P39059 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
COL15A1P39059 TRAV11-201ENST00000539512 339 ntBASIC7.66□□□□□ -1.18
COL15A1P39059 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.66□□□□□ -1.18
COL15A1P39059 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC7.66□□□□□ -1.18
COL15A1P39059 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.66□□□□□ -1.18
COL15A1P39059 AL021707.7-201ENST00000607991 416 ntBASIC7.66□□□□□ -1.18
COL15A1P39059 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.66□□□□□ -1.18
COL15A1P39059 AC097634.1-201ENST00000604491 2467 ntBASIC7.66□□□□□ -1.18
COL15A1P39059 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
COL15A1P39059 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL15A1P39059 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.66□□□□□ -1.18
COL15A1P39059 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL15A1P39059 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL15A1P39059 PDZK1P1-202ENST00000425209 1350 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.65□□□□□ -1.18
COL15A1P39059 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL15A1P39059 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.65□□□□□ -1.18
COL15A1P39059 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
COL15A1P39059 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC7.65□□□□□ -1.18
COL15A1P39059 SELENOWP1-201ENST00000322792 252 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 RN7SKP77-201ENST00000363261 353 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 RN7SKP160-201ENST00000363804 340 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL15A1P39059 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL15A1P39059 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL15A1P39059 SNRPEP6-201ENST00000407465 277 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.65□□□□□ -1.18
COL15A1P39059 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.65□□□□□ -1.18
COL15A1P39059 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.65□□□□□ -1.18
COL15A1P39059 MTCO3P17-201ENST00000443775 513 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL15A1P39059 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC7.65□□□□□ -1.18
COL15A1P39059 RN7SL515P-201ENST00000463999 297 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 AOX3P-204ENST00000491025 2107 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 RN7SL466P-201ENST00000497546 295 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC7.65□□□□□ -1.18
COL15A1P39059 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.65□□□□□ -1.18
COL15A1P39059 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.65□□□□□ -1.18
COL15A1P39059 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.65□□□□□ -1.18
COL15A1P39059 FAM27E4-201ENST00000605259 342 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 AL139041.1-201ENST00000605480 610 ntBASIC7.65□□□□□ -1.18
COL15A1P39059 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.65□□□□□ -1.18
COL15A1P39059 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.65□□□□□ -1.18
COL15A1P39059 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL15A1P39059 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.65□□□□□ -1.19
COL15A1P39059 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.65□□□□□ -1.19
COL15A1P39059 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
COL15A1P39059 Z83820.1-201ENST00000456978 1499 ntBASIC7.65□□□□□ -1.19
COL15A1P39059 AC027279.4-201ENST00000624371 2072 ntBASIC7.65□□□□□ -1.19
COL15A1P39059 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.65□□□□□ -1.19
COL15A1P39059 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
COL15A1P39059 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms