Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC009963.4-201ENST00000448535 339 ntBASIC6.09□□□□□ -1.43
KRT20P35900 BUD31P2-201ENST00000449374 300 ntBASIC6.09□□□□□ -1.43
KRT20P35900 HSPE1P22-201ENST00000456856 327 ntBASIC6.09□□□□□ -1.43
KRT20P35900 AC236972.4-201ENST00000458091 963 ntBASIC6.09□□□□□ -1.43
KRT20P35900 RPS3AP49-201ENST00000472161 790 ntBASIC6.09□□□□□ -1.43
KRT20P35900 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.09□□□□□ -1.43
KRT20P35900 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.09□□□□□ -1.43
KRT20P35900 AC104997.1-201ENST00000519761 717 ntBASIC6.09□□□□□ -1.43
KRT20P35900 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.09□□□□□ -1.43
KRT20P35900 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.09□□□□□ -1.43
KRT20P35900 AC084337.1-201ENST00000524809 686 ntBASIC6.09□□□□□ -1.43
KRT20P35900 AC084851.2-201ENST00000530377 364 ntBASIC6.09□□□□□ -1.43
KRT20P35900 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.09□□□□□ -1.43
KRT20P35900 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.09□□□□□ -1.43
KRT20P35900 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.09□□□□□ -1.43
KRT20P35900 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.09□□□□□ -1.43
KRT20P35900 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.09□□□□□ -1.43
KRT20P35900 AC024267.2-201ENST00000582737 417 ntBASIC6.09□□□□□ -1.43
KRT20P35900 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.09□□□□□ -1.43
KRT20P35900 AL445649.1-201ENST00000615941 691 ntBASIC6.09□□□□□ -1.43
KRT20P35900 AC026367.3-201ENST00000619032 590 ntBASIC6.09□□□□□ -1.43
KRT20P35900 RAB28P4-201ENST00000622233 665 ntBASIC6.09□□□□□ -1.43
KRT20P35900 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
KRT20P35900 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.09□□□□□ -1.43
KRT20P35900 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.09□□□□□ -1.43
KRT20P35900 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.09□□□□□ -1.43
KRT20P35900 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
KRT20P35900 UGT2B24P-201ENST00000514441 1597 ntBASIC6.09□□□□□ -1.43
KRT20P35900 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRT20P35900 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.09□□□□□ -1.44
KRT20P35900 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.09□□□□□ -1.44
KRT20P35900 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.09□□□□□ -1.44
KRT20P35900 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.09□□□□□ -1.44
KRT20P35900 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.08□□□□□ -1.44
KRT20P35900 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.08□□□□□ -1.44
KRT20P35900 AC062022.1-201ENST00000451026 1684 ntBASIC6.08□□□□□ -1.44
KRT20P35900 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 PSMC1P6-201ENST00000477233 1319 ntBASIC6.08□□□□□ -1.44
KRT20P35900 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 RNA5SP308-201ENST00000362532 115 ntBASIC6.08□□□□□ -1.44
KRT20P35900 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.08□□□□□ -1.44
KRT20P35900 SNORD94-201ENST00000386037 137 ntBASIC6.08□□□□□ -1.44
KRT20P35900 NPM1P37-201ENST00000403105 874 ntBASIC6.08□□□□□ -1.44
KRT20P35900 AL590635.1-201ENST00000406314 586 ntBASIC6.08□□□□□ -1.44
KRT20P35900 AC006509.1-201ENST00000420788 634 ntBASIC6.08□□□□□ -1.44
KRT20P35900 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT20P35900 NDUFA5P1-201ENST00000433858 341 ntBASIC6.08□□□□□ -1.44
KRT20P35900 AL645939.3-201ENST00000435408 225 ntBASIC6.08□□□□□ -1.44
KRT20P35900 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT20P35900 HMGN1P32-201ENST00000441744 256 ntBASIC6.08□□□□□ -1.44
KRT20P35900 AL157884.3-201ENST00000448273 1184 ntBASIC6.08□□□□□ -1.44
KRT20P35900 AC063955.1-201ENST00000462872 685 ntBASIC6.08□□□□□ -1.44
KRT20P35900 MARK2P8-201ENST00000476069 952 ntBASIC6.08□□□□□ -1.44
KRT20P35900 RPL23AP68-201ENST00000480924 445 ntBASIC6.08□□□□□ -1.44
KRT20P35900 LARP7P4-201ENST00000481075 878 ntBASIC6.08□□□□□ -1.44
KRT20P35900 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.08□□□□□ -1.44
KRT20P35900 AC131392.1-201ENST00000506490 633 ntBASIC6.08□□□□□ -1.44
KRT20P35900 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT20P35900 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT20P35900 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.08□□□□□ -1.44
KRT20P35900 AC078878.1-201ENST00000539832 958 ntBASIC6.08□□□□□ -1.44
KRT20P35900 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
KRT20P35900 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.08□□□□□ -1.44
KRT20P35900 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 RN7SL66P-201ENST00000582099 264 ntBASIC6.08□□□□□ -1.44
KRT20P35900 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.08□□□□□ -1.44
KRT20P35900 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.08□□□□□ -1.44
KRT20P35900 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT20P35900 AC105105.5-201ENST00000622635 1294 ntBASIC6.08□□□□□ -1.44
KRT20P35900 AC114546.4-201ENST00000624413 369 ntBASIC6.08□□□□□ -1.44
KRT20P35900 AC068213.1-201ENST00000625124 226 ntBASIC6.08□□□□□ -1.44
KRT20P35900 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
KRT20P35900 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.08□□□□□ -1.44
KRT20P35900 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT20P35900 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
KRT20P35900 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.08□□□□□ -1.44
KRT20P35900 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.08□□□□□ -1.44
KRT20P35900 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT20P35900 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.07□□□□□ -1.44
KRT20P35900 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT20P35900 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.07□□□□□ -1.44
KRT20P35900 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT20P35900 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRT20P35900 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
KRT20P35900 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.07□□□□□ -1.44
KRT20P35900 RNU6-249P-201ENST00000363016 102 ntBASIC6.07□□□□□ -1.44
KRT20P35900 RNU4-7P-201ENST00000364758 141 ntBASIC6.07□□□□□ -1.44
KRT20P35900 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT20P35900 AL360271.1-201ENST00000395679 510 ntBASIC6.07□□□□□ -1.44
KRT20P35900 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT20P35900 RPL10P10-201ENST00000403509 664 ntBASIC6.07□□□□□ -1.44
KRT20P35900 RPL5P19-201ENST00000404228 893 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms