Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 OR6M2P-201ENST00000529831 871 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 TOMM20P1-201ENST00000534518 427 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.96□□□□□ -1.46
SHMT2P34897 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.96□□□□□ -1.46
SHMT2P34897 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.96□□□□□ -1.46
SHMT2P34897 GLYATL1P2-202ENST00000588046 902 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.96□□□□□ -1.46
SHMT2P34897 AC073333.2-201ENST00000603589 769 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 AC091167.5-201ENST00000605689 894 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 AP001437.1-201ENST00000608783 456 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.96□□□□□ -1.46
SHMT2P34897 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHMT2P34897 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.96□□□□□ -1.46
SHMT2P34897 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.96□□□□□ -1.46
SHMT2P34897 CAP1P2-201ENST00000417455 1409 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 AC079753.1-201ENST00000623243 3868 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.96□□□□□ -1.46
SHMT2P34897 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHMT2P34897 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SHMT2P34897 AL355834.1-201ENST00000556602 3965 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.96□□□□□ -1.46
SHMT2P34897 MSL3P1-202ENST00000440028 1468 ntBASIC5.96□□□□□ -1.46
SHMT2P34897 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHMT2P34897 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.96□□□□□ -1.46
SHMT2P34897 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 COX6B1P3-201ENST00000312310 260 ntBASIC5.95□□□□□ -1.46
SHMT2P34897 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 RNU1-134P-201ENST00000362935 165 ntBASIC5.95□□□□□ -1.46
SHMT2P34897 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHMT2P34897 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.95□□□□□ -1.46
SHMT2P34897 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC069154.1-201ENST00000432914 542 ntBASIC5.95□□□□□ -1.46
SHMT2P34897 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 PNKDP1-201ENST00000435914 430 ntBASIC5.95□□□□□ -1.46
SHMT2P34897 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC068228.1-201ENST00000461723 211 ntBASIC5.95□□□□□ -1.46
SHMT2P34897 AP002884.1-201ENST00000479691 655 ntBASIC5.95□□□□□ -1.46
SHMT2P34897 AC114728.1-201ENST00000488289 483 ntBASIC5.95□□□□□ -1.46
SHMT2P34897 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.95□□□□□ -1.46
SHMT2P34897 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC130360.2-201ENST00000533477 1556 ntBASIC5.95□□□□□ -1.46
SHMT2P34897 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC141002.1-201ENST00000607025 279 ntBASIC5.95□□□□□ -1.46
SHMT2P34897 AC092266.1-201ENST00000610958 165 ntBASIC5.95□□□□□ -1.46
SHMT2P34897 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.95□□□□□ -1.46
SHMT2P34897 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.95□□□□□ -1.46
SHMT2P34897 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.95□□□□□ -1.46
SHMT2P34897 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
SHMT2P34897 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.95□□□□□ -1.46
SHMT2P34897 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHMT2P34897 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHMT2P34897 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SHMT2P34897 AC022325.1-201ENST00000502748 2199 ntBASIC5.94□□□□□ -1.46
SHMT2P34897 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.94□□□□□ -1.46
SHMT2P34897 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHMT2P34897 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.94□□□□□ -1.46
SHMT2P34897 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHMT2P34897 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.94□□□□□ -1.46
SHMT2P34897 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SHMT2P34897 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHMT2P34897 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.94□□□□□ -1.46
SHMT2P34897 RNA5SP110-201ENST00000362638 115 ntBASIC5.94□□□□□ -1.46
SHMT2P34897 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.94□□□□□ -1.46
SHMT2P34897 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.94□□□□□ -1.46
SHMT2P34897 SNORA51.9-201ENST00000384295 124 ntBASIC5.94□□□□□ -1.46
SHMT2P34897 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHMT2P34897 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.94□□□□□ -1.46
SHMT2P34897 AC007562.1-201ENST00000421819 517 ntBASIC5.94□□□□□ -1.46
SHMT2P34897 RPL12P12-201ENST00000424633 501 ntBASIC5.94□□□□□ -1.46
SHMT2P34897 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.94□□□□□ -1.46
SHMT2P34897 AMYP1-201ENST00000440059 1023 ntBASIC5.94□□□□□ -1.46
SHMT2P34897 TRIM60P16-201ENST00000444048 694 ntBASIC5.94□□□□□ -1.46
SHMT2P34897 AC023274.2-201ENST00000445264 521 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms