Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HOXC8P31273 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC8P31273 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
HOXC8P31273 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC8P31273 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HOXC8P31273 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC8P31273 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC8P31273 AC006600.2-201ENST00000624834 2506 ntBASIC6.64□□□□□ -1.35
HOXC8P31273 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXC8P31273 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HOXC8P31273 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXC8P31273 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
HOXC8P31273 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 Z95114.1-201ENST00000624264 14574 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.63□□□□□ -1.35
HOXC8P31273 RNA5SP375-201ENST00000362975 119 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
HOXC8P31273 NEPNP-201ENST00000404786 1371 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXC8P31273 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 BMS1P13-201ENST00000417301 885 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.63□□□□□ -1.35
HOXC8P31273 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.63□□□□□ -1.35
HOXC8P31273 AC127526.2-201ENST00000426436 775 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 AL445928.1-201ENST00000435545 222 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.63□□□□□ -1.35
HOXC8P31273 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.63□□□□□ -1.35
HOXC8P31273 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXC8P31273 AC115223.1-201ENST00000466377 870 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.63□□□□□ -1.35
HOXC8P31273 AP004607.6-201ENST00000525033 1202 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 HMGN2P36-201ENST00000529541 409 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.63□□□□□ -1.35
HOXC8P31273 PRELID3BP3-201ENST00000584963 545 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXC8P31273 BX323046.1-201ENST00000610145 535 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXC8P31273 AL021918.2-201ENST00000613415 194 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 AC004477.3-201ENST00000614061 590 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 TCL6_3.1-201ENST00000619064 137 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 AC011369.2-201ENST00000624423 1567 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 MIR193BHG-214ENST00000641765 509 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.63□□□□□ -1.35
HOXC8P31273 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
HOXC8P31273 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXC8P31273 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
HOXC8P31273 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXC8P31273 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC8P31273 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC8P31273 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC8P31273 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HOXC8P31273 SALL4P7-201ENST00000555779 3120 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 SHQ1P1-201ENST00000437111 1544 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 PDZK1P1-202ENST00000425209 1350 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC8P31273 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC8P31273 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HOXC8P31273 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC8P31273 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 BMS1P17-202ENST00000416720 316 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 NMD3P2-201ENST00000421815 761 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXC8P31273 RPS7P3-201ENST00000443360 580 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 NPM1P19-201ENST00000450070 712 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 RPL5P12-201ENST00000477071 851 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 AC083795.1-201ENST00000491760 320 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 AL136038.1-201ENST00000497246 351 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 AC112184.1-201ENST00000505179 312 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC8P31273 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC8P31273 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXC8P31273 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC8P31273 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.62□□□□□ -1.35
HOXC8P31273 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXC8P31273 AL354950.1-201ENST00000614150 568 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 AL049767.1-202ENST00000637826 242 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC8P31273 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC8P31273 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC8P31273 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HOXC8P31273 AC105749.1-201ENST00000631338 2008 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC8P31273 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.62□□□□□ -1.35
HOXC8P31273 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HOXC8P31273 CR788268.1-201ENST00000603931 1809 ntBASIC6.62□□□□□ -1.35
HOXC8P31273 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
HOXC8P31273 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC8P31273 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HOXC8P31273 AL391261.1-201ENST00000555712 1479 ntBASIC6.61□□□□□ -1.35
HOXC8P31273 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC8P31273 AC092821.2-201ENST00000545710 2042 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms