Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FREM3P0C091 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
FREM3P0C091 AC023490.2-201ENST00000359859 470 ntBASIC5.45□□□□□ -1.54
FREM3P0C091 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
FREM3P0C091 OR2W4P-201ENST00000406496 926 ntBASIC5.45□□□□□ -1.54
FREM3P0C091 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FREM3P0C091 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.45□□□□□ -1.54
FREM3P0C091 AL353662.1-201ENST00000439099 327 ntBASIC5.45□□□□□ -1.54
FREM3P0C091 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.45□□□□□ -1.54
FREM3P0C091 AP006222.1-205ENST00000450734 457 ntBASIC5.45□□□□□ -1.54
FREM3P0C091 RPL7L1P4-201ENST00000513004 707 ntBASIC5.45□□□□□ -1.54
FREM3P0C091 SETP21-201ENST00000514799 892 ntBASIC5.45□□□□□ -1.54
FREM3P0C091 RNA5SP438-201ENST00000516561 112 ntBASIC5.45□□□□□ -1.54
FREM3P0C091 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.45□□□□□ -1.54
FREM3P0C091 AP003396.4-201ENST00000527574 265 ntBASIC5.45□□□□□ -1.54
FREM3P0C091 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
FREM3P0C091 AP005119.1-201ENST00000580956 292 ntBASIC5.45□□□□□ -1.54
FREM3P0C091 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.45□□□□□ -1.54
FREM3P0C091 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.45□□□□□ -1.54
FREM3P0C091 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.45□□□□□ -1.54
FREM3P0C091 AL357562.1-201ENST00000624911 609 ntBASIC5.45□□□□□ -1.54
FREM3P0C091 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
FREM3P0C091 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FREM3P0C091 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FREM3P0C091 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
FREM3P0C091 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FREM3P0C091 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
FREM3P0C091 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FREM3P0C091 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.44□□□□□ -1.54
FREM3P0C091 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.44□□□□□ -1.54
FREM3P0C091 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.44□□□□□ -1.54
FREM3P0C091 RNA5SP510-201ENST00000364697 99 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 RNA5SP156-201ENST00000410250 110 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 RPS14P4-201ENST00000415880 418 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 RPL23AP18-201ENST00000416139 468 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 CHEK2P5-201ENST00000423877 246 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
FREM3P0C091 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.44□□□□□ -1.54
FREM3P0C091 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.44□□□□□ -1.54
FREM3P0C091 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.44□□□□□ -1.54
FREM3P0C091 AL359839.1-201ENST00000451975 1160 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 AC083795.1-201ENST00000491760 320 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.44□□□□□ -1.54
FREM3P0C091 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FREM3P0C091 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.44□□□□□ -1.54
FREM3P0C091 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.44□□□□□ -1.54
FREM3P0C091 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.44□□□□□ -1.54
FREM3P0C091 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.44□□□□□ -1.54
FREM3P0C091 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.44□□□□□ -1.54
FREM3P0C091 AC002519.2-203ENST00000567043 837 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 AC012146.2-201ENST00000576545 416 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FREM3P0C091 AC024589.2-201ENST00000605642 1294 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.44□□□□□ -1.54
FREM3P0C091 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.44□□□□□ -1.54
FREM3P0C091 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FREM3P0C091 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.44□□□□□ -1.54
FREM3P0C091 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.44□□□□□ -1.54
FREM3P0C091 AC084782.1-201ENST00000564401 2465 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.44□□□□□ -1.54
FREM3P0C091 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
FREM3P0C091 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.44□□□□□ -1.54
FREM3P0C091 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.44□□□□□ -1.54
FREM3P0C091 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FREM3P0C091 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FREM3P0C091 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
FREM3P0C091 RN7SKP15-201ENST00000364742 309 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 KIF4CP-201ENST00000422742 1279 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 AC002504.1-201ENST00000438281 691 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.44□□□□□ -1.54
FREM3P0C091 AC112187.1-201ENST00000455837 479 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.44□□□□□ -1.54
FREM3P0C091 NENFP3-201ENST00000503735 313 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.44□□□□□ -1.54
FREM3P0C091 AC008429.4-201ENST00000521201 182 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.44□□□□□ -1.54
FREM3P0C091 AP000648.1-201ENST00000529682 397 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.44□□□□□ -1.54
FREM3P0C091 AL031601.1-201ENST00000605702 394 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 AL136097.3-201ENST00000611097 505 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 OR8G3P-202ENST00000641572 1255 ntBASIC5.44□□□□□ -1.54
FREM3P0C091 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
FREM3P0C091 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FREM3P0C091 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FREM3P0C091 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
FREM3P0C091 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.43□□□□□ -1.54
FREM3P0C091 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
FREM3P0C091 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 HSPD1P9-201ENST00000420325 1636 ntBASIC5.43□□□□□ -1.54
FREM3P0C091 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.43□□□□□ -1.54
FREM3P0C091 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.43□□□□□ -1.54
FREM3P0C091 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 AL117339.4-201ENST00000608335 7063 ntBASIC5.43□□□□□ -1.54
FREM3P0C091 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms