Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 UBE2V2P1-201ENST00000434717 398 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 AC092473.1-201ENST00000441098 221 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 OR13K1P-201ENST00000444577 975 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 AC073109.1-201ENST00000445066 978 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 AC104109.1-201ENST00000498563 436 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 SETP21-201ENST00000514799 892 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 AP004607.6-201ENST00000525033 1202 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 NPIPB1P-202ENST00000588786 828 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 AC141002.1-201ENST00000607025 279 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 MIR6793-201ENST00000612376 63 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 AL136228.1-201ENST00000622221 319 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-DOAP06340 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-DOAP06340 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-DOAP06340 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-DOAP06340 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 AL359091.1-201ENST00000449048 1734 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC105749.1-201ENST00000631338 2008 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 ZNF92P1Y-201ENST00000415010 1191 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC106901.1-201ENST00000425086 698 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC245884.2-201ENST00000426257 404 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 AL390879.2-203ENST00000426943 1121 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 SETP20-201ENST00000457046 852 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 RN7SL193P-201ENST00000491708 276 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 HAUS1P1-201ENST00000505275 832 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC114781.3-201ENST00000512083 142 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC073581.1-201ENST00000519036 575 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC092121.1-201ENST00000569452 202 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 MIR3189-201ENST00000578735 73 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 MIR3614-201ENST00000581261 86 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 AC022919.1-201ENST00000624979 626 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 AF287957.1-201ENST00000607368 1595 ntBASIC7.24□□□□□ -1.25
HLA-DOAP06340 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.24□□□□□ -1.25
HLA-DOAP06340 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
HLA-DOAP06340 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 Y_RNA.110-201ENST00000363220 99 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 MTCYBP32-201ENST00000427945 1084 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 AL451136.1-201ENST00000435399 325 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 RPL23AP19-201ENST00000436229 369 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.23□□□□□ -1.25
HLA-DOAP06340 AL445466.1-201ENST00000448432 357 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 AC016027.4-201ENST00000450866 277 ntBASIC7.23□□□□□ -1.25
HLA-DOAP06340 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HLA-DOAP06340 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms