Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MT-ND1P03886 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.65□□□□□ -1.5
MT-ND1P03886 RNA5SP85-201ENST00000365378 119 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
MT-ND1P03886 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
MT-ND1P03886 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MT-ND1P03886 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MT-ND1P03886 AC244033.1-201ENST00000426826 870 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
MT-ND1P03886 OR6R1P-201ENST00000431838 940 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.65□□□□□ -1.5
MT-ND1P03886 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.65□□□□□ -1.5
MT-ND1P03886 WDR82P2-201ENST00000444540 928 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.65□□□□□ -1.5
MT-ND1P03886 AL445991.1-201ENST00000450381 475 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.65□□□□□ -1.5
MT-ND1P03886 RPL12P31-201ENST00000478433 450 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 AC005017.1-201ENST00000482002 490 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.65□□□□□ -1.5
MT-ND1P03886 OR2A3P-201ENST00000493774 953 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 KHDC1P1-201ENST00000511053 508 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MT-ND1P03886 snoU109.5-201ENST00000516231 132 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.65□□□□□ -1.5
MT-ND1P03886 AC037479.1-201ENST00000558361 625 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 MIR4732-201ENST00000581873 76 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 AL390877.1-201ENST00000605704 214 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 AC141002.1-201ENST00000607025 279 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 U91328.4-201ENST00000608919 517 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 MIR6883-201ENST00000614952 78 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
MT-ND1P03886 SNX18P12-201ENST00000624821 759 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.65□□□□□ -1.5
MT-ND1P03886 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
MT-ND1P03886 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.51
MT-ND1P03886 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.65□□□□□ -1.51
MT-ND1P03886 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
MT-ND1P03886 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
MT-ND1P03886 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
MT-ND1P03886 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
MT-ND1P03886 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
MT-ND1P03886 SAMM50P1-201ENST00000455403 1399 ntBASIC5.65□□□□□ -1.51
MT-ND1P03886 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
MT-ND1P03886 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
MT-ND1P03886 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
MT-ND1P03886 AC140479.2-201ENST00000421567 3130 ntBASIC5.65□□□□□ -1.51
MT-ND1P03886 AC114774.1-201ENST00000507410 1770 ntBASIC5.65□□□□□ -1.51
MT-ND1P03886 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
MT-ND1P03886 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
MT-ND1P03886 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
MT-ND1P03886 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.64□□□□□ -1.51
MT-ND1P03886 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.64□□□□□ -1.51
MT-ND1P03886 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
MT-ND1P03886 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
MT-ND1P03886 AL121839.2-201ENST00000565058 6943 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
MT-ND1P03886 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
MT-ND1P03886 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
MT-ND1P03886 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
MT-ND1P03886 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.64□□□□□ -1.51
MT-ND1P03886 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 ARSFP1-201ENST00000398758 477 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.64□□□□□ -1.51
MT-ND1P03886 DHFRP2-201ENST00000414224 547 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.64□□□□□ -1.51
MT-ND1P03886 SOCS5P1-201ENST00000440415 949 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 CUBNP2-201ENST00000443534 1139 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 AL512593.1-201ENST00000444758 779 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 AL133351.3-201ENST00000454998 193 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.64□□□□□ -1.51
MT-ND1P03886 Z83838.1-202ENST00000456225 839 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 RN7SL502P-201ENST00000481857 290 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 CR383656.1-201ENST00000484916 377 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 GM2AP2-201ENST00000491764 562 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.64□□□□□ -1.51
MT-ND1P03886 CCDC11P1-201ENST00000503137 1162 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.64□□□□□ -1.51
MT-ND1P03886 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.64□□□□□ -1.51
MT-ND1P03886 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.64□□□□□ -1.51
MT-ND1P03886 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.64□□□□□ -1.51
MT-ND1P03886 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.64□□□□□ -1.51
MT-ND1P03886 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MT-ND1P03886 AC023310.2-201ENST00000553844 547 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.64□□□□□ -1.51
MT-ND1P03886 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.64□□□□□ -1.51
MT-ND1P03886 AC008555.7-201ENST00000605008 583 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.64□□□□□ -1.51
MT-ND1P03886 AC068726.1-201ENST00000610993 341 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 AC010998.3-201ENST00000613871 631 ntBASIC5.64□□□□□ -1.51
MT-ND1P03886 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms