Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.74□□□□□ -1.01
RNF40O75150 RAB28P3-201ENST00000448325 597 ntBASIC8.74□□□□□ -1.01
RNF40O75150 RPL21P92-201ENST00000454107 476 ntBASIC8.74□□□□□ -1.01
RNF40O75150 RN7SL856P-201ENST00000461754 298 ntBASIC8.74□□□□□ -1.01
RNF40O75150 LARP1BP2-201ENST00000486594 519 ntBASIC8.74□□□□□ -1.01
RNF40O75150 SAP18P1-201ENST00000512058 390 ntBASIC8.74□□□□□ -1.01
RNF40O75150 AC226119.2-201ENST00000513501 530 ntBASIC8.74□□□□□ -1.01
RNF40O75150 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.74□□□□□ -1.01
RNF40O75150 MTCO2P4-201ENST00000517968 247 ntBASIC8.74□□□□□ -1.01
RNF40O75150 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC8.74□□□□□ -1.01
RNF40O75150 AC092747.2-201ENST00000545069 983 ntBASIC8.74□□□□□ -1.01
RNF40O75150 PSMB7P1-201ENST00000556349 514 ntBASIC8.74□□□□□ -1.01
RNF40O75150 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC8.74□□□□□ -1.01
RNF40O75150 APOOP5-202ENST00000564761 566 ntBASIC8.74□□□□□ -1.01
RNF40O75150 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.74□□□□□ -1.01
RNF40O75150 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 AP001542.2-201ENST00000593141 364 ntBASIC8.74□□□□□ -1.01
RNF40O75150 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC8.74□□□□□ -1.01
RNF40O75150 AC010385.2-201ENST00000603743 490 ntBASIC8.74□□□□□ -1.01
RNF40O75150 BNIP3P10-201ENST00000605360 577 ntBASIC8.74□□□□□ -1.01
RNF40O75150 AP000238.1-201ENST00000608759 426 ntBASIC8.74□□□□□ -1.01
RNF40O75150 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC8.74□□□□□ -1.01
RNF40O75150 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 CARMN-212ENST00000614896 536 ntTSL 5 BASIC8.74□□□□□ -1.01
RNF40O75150 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.74□□□□□ -1.01
RNF40O75150 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 AC009948.5-201ENST00000624360 4406 ntBASIC8.74□□□□□ -1.01
RNF40O75150 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
RNF40O75150 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.74□□□□□ -1.01
RNF40O75150 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
RNF40O75150 ZNF733P-202ENST00000444809 1573 ntBASIC8.73□□□□□ -1.01
RNF40O75150 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC8.73□□□□□ -1.01
RNF40O75150 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RNF40O75150 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 CUL4AP1-201ENST00000514750 1863 ntBASIC8.73□□□□□ -1.01
RNF40O75150 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
RNF40O75150 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 RN7SKP173-201ENST00000362821 315 ntBASIC8.73□□□□□ -1.01
RNF40O75150 SNORD56.2-201ENST00000363242 71 ntBASIC8.73□□□□□ -1.01
RNF40O75150 Y_RNA.296-201ENST00000364930 108 ntBASIC8.73□□□□□ -1.01
RNF40O75150 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RNF40O75150 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC8.73□□□□□ -1.01
RNF40O75150 HMGB3P31-201ENST00000413333 595 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 GNAI2P2-201ENST00000417003 916 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AC231533.2-201ENST00000419045 978 ntBASIC8.73□□□□□ -1.01
RNF40O75150 PDCL2P1-201ENST00000419302 352 ntBASIC8.73□□□□□ -1.01
RNF40O75150 RPL17P17-201ENST00000419491 557 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC8.73□□□□□ -1.01
RNF40O75150 AC009303.1-201ENST00000426307 352 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AL035410.1-201ENST00000427409 427 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC8.73□□□□□ -1.01
RNF40O75150 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 WBP1LP7-201ENST00000437905 363 ntBASIC8.73□□□□□ -1.01
RNF40O75150 FDPSP8-201ENST00000438304 1089 ntBASIC8.73□□□□□ -1.01
RNF40O75150 RPL7L1P11-201ENST00000446092 721 ntBASIC8.73□□□□□ -1.01
RNF40O75150 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.73□□□□□ -1.01
RNF40O75150 RN7SL218P-201ENST00000464637 299 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AC087312.1-201ENST00000471411 480 ntBASIC8.73□□□□□ -1.01
RNF40O75150 RPL17P37-201ENST00000490729 548 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC8.73□□□□□ -1.01
RNF40O75150 AC105914.1-201ENST00000511798 226 ntBASIC8.73□□□□□ -1.01
RNF40O75150 RNU6-794P-201ENST00000517261 64 ntBASIC8.73□□□□□ -1.01
RNF40O75150 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8.73□□□□□ -1.01
RNF40O75150 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC8.73□□□□□ -1.01
RNF40O75150 IGLV7-35-201ENST00000523314 340 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.73□□□□□ -1.01
RNF40O75150 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC8.73□□□□□ -1.01
RNF40O75150 OR4C2P-201ENST00000530855 1064 ntBASIC8.73□□□□□ -1.01
RNF40O75150 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RNF40O75150 AC034105.2-201ENST00000561866 238 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC8.73□□□□□ -1.01
RNF40O75150 AC006504.6-201ENST00000590142 199 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC8.73□□□□□ -1.01
RNF40O75150 AC087283.1-201ENST00000604029 1074 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AC124303.1-201ENST00000605703 360 ntBASIC8.73□□□□□ -1.01
RNF40O75150 AL589666.2-201ENST00000624603 618 ntBASIC8.73□□□□□ -1.01
RNF40O75150 TTK-211ENST00000627129 240 ntTSL 5 BASIC8.73□□□□□ -1.01
RNF40O75150 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms