Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC188H7C350 AL354766.1-201ENST00000423396 542 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 KATNBL1P2-201ENST00000433311 835 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 RPS19P6-201ENST00000441327 433 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 OR2L9P-201ENST00000444456 913 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 AL133351.3-201ENST00000454998 193 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC188H7C350 RPL5P33-201ENST00000487833 905 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 GLUD1P3-202ENST00000508551 200 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC188H7C350 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC188H7C350 AC134698.1-201ENST00000511619 643 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC188H7C350 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC188H7C350 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC188H7C350 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
CCDC188H7C350 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC188H7C350 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC188H7C350 AC090424.1-201ENST00000535243 736 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
CCDC188H7C350 AC089984.3-201ENST00000552838 363 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC188H7C350 MIR378H-201ENST00000579966 83 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC188H7C350 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 MIR8082-201ENST00000612488 81 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 AC096708.4-201ENST00000620563 552 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 AC022400.9-201ENST00000623633 273 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC188H7C350 AC090220.1-201ENST00000593078 1699 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC188H7C350 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CCDC188H7C350 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC188H7C350 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.24□□□□□ -1.41
CCDC188H7C350 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CCDC188H7C350 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CCDC188H7C350 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC188H7C350 AL137141.1-201ENST00000624622 4836 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 NPM1P38-201ENST00000403835 865 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC188H7C350 GPN3P1-201ENST00000423883 535 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 AP003385.1-201ENST00000426387 893 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 CRIP1P1-201ENST00000427567 185 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 AK3P5-201ENST00000432033 519 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC188H7C350 AC099670.2-201ENST00000435130 321 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 BMS1P11-201ENST00000442351 885 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC188H7C350 AC009244.1-201ENST00000450566 258 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 BMS1P9-201ENST00000457640 885 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 RN7SL83P-201ENST00000468131 297 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC188H7C350 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC188H7C350 AC008868.1-201ENST00000509786 737 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 AC111000.6-201ENST00000514471 709 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 RNA5SP434-201ENST00000516647 121 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC188H7C350 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 CYCSP25-201ENST00000525280 316 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC188H7C350 CHEK2P2-201ENST00000554701 672 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 AP005212.4-201ENST00000614206 710 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC188H7C350 MIR6811-201ENST00000620409 58 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 AC027506.1-201ENST00000621395 198 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 AL109924.4-201ENST00000623089 670 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 AC005618.4-201ENST00000625053 554 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
CCDC188H7C350 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC188H7C350 AC063952.1-203ENST00000634410 658 ntBASIC6.24□□□□□ -1.41
CCDC188H7C350 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
CCDC188H7C350 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC188H7C350 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC188H7C350 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC188H7C350 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CCDC188H7C350 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CCDC188H7C350 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC188H7C350 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CCDC188H7C350 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms