Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CCDC187A0A096LP49 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC187A0A096LP49 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC187A0A096LP49 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CCDC187A0A096LP49 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.16□□□□□ -1.42
CCDC187A0A096LP49 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC187A0A096LP49 AC125238.2-201ENST00000430003 1440 ntBASIC6.16□□□□□ -1.42
CCDC187A0A096LP49 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC187A0A096LP49 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 CR382285.2-201ENST00000624662 1495 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 WBP11P1-201ENST00000562560 1931 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC027575.3-201ENST00000583058 2747 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AP005139.1-201ENST00000580702 1647 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC010329.1-201ENST00000593903 8328 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 RNU6-1331P-201ENST00000363658 106 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 RN7SKP108-201ENST00000411367 328 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC019205.1-201ENST00000421830 730 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 RPL23AP85-201ENST00000421838 433 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC008753.1-201ENST00000423096 284 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 Z68868.1-201ENST00000429048 544 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC003989.1-201ENST00000434569 565 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 FABP5P2-201ENST00000439042 408 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 PPIAP27-201ENST00000453800 265 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 MTND6P32-201ENST00000457611 483 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 RN7SL643P-201ENST00000471845 291 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC095052.1-201ENST00000509955 863 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 KHDC1P1-201ENST00000511053 508 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 SUMO2P7-201ENST00000511179 285 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 SETP21-201ENST00000514799 892 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 MTATP6P9-201ENST00000515039 680 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 RNU6-491P-201ENST00000516099 110 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 RNA5SP206-201ENST00000516703 121 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 RN7SKP35-201ENST00000517210 151 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC036111.2-201ENST00000533247 901 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 MRPS21P8-201ENST00000569196 235 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC008521.2-201ENST00000591021 259 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC068313.1-201ENST00000604028 1008 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC017076.1-201ENST00000607613 578 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC120053.1-201ENST00000607706 736 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC092681.3-201ENST00000609463 678 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AL356608.1-201ENST00000610034 820 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AP000894.4-201ENST00000610185 483 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC024884.1-201ENST00000620583 399 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 AC073862.4-201ENST00000622982 854 ntBASIC6.15□□□□□ -1.42
CCDC187A0A096LP49 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 MTCO1P28-201ENST00000574177 1528 ntBASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.15□□□□□ -1.43
CCDC187A0A096LP49 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC187A0A096LP49 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms