Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC018765.1-201ENST00000623357 3446 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 RN7SKP17-201ENST00000411242 351 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AL035422.1-201ENST00000414193 397 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 RPSAP32-201ENST00000432681 526 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AC023141.3-201ENST00000436698 278 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AL663074.2-201ENST00000440621 479 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 MRPS5P3-201ENST00000515577 166 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AC078899.1-201ENST00000521432 1185 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AP003080.1-202ENST00000526526 915 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AP001000.1-201ENST00000526843 742 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AC093388.1-201ENST00000609166 430 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AC073488.6-201ENST00000632293 754 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 RBMY1HP-201ENST00000382759 1389 ntBASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAV27A0A087WT01 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC096632.2-201ENST00000438139 1239 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 RPSAP40-201ENST00000442343 891 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 RPS7P3-201ENST00000443360 580 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC010240.2-201ENST00000445363 1205 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 RSU1P1-201ENST00000453416 441 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 PPIAP7-201ENST00000454070 489 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 RPL5P12-201ENST00000477071 851 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 RPS27P20-201ENST00000492051 246 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC008629.2-201ENST00000503783 483 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 MAST4-IT1-201ENST00000514241 658 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AP000620.1-201ENST00000527147 504 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC007346.1-201ENST00000569208 867 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AL078601.3-201ENST00000573303 535 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 MIR4701-201ENST00000583094 63 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC092681.3-201ENST00000609463 678 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AL021918.2-201ENST00000613415 194 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC015819.1-201ENST00000613588 663 ntBASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAV27A0A087WT01 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms