Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 CCRL1P1-201ENST00000449542 1053 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 SUN3-208ENST00000453192 801 ntTSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 RPL7L1P3-201ENST00000455249 689 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AL359385.1-201ENST00000456509 365 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC004890.1-201ENST00000461005 181 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SSU72Q9NP77 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC097263.1-201ENST00000496795 606 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC008565.1-201ENST00000509046 885 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 OR5H7P-201ENST00000514084 930 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 MTCYBP19-201ENST00000517463 1124 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 EEF1B2P2-201ENST00000519625 676 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AP003385.2-201ENST00000524910 973 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AP002963.1-201ENST00000530590 184 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 OR4A6P-201ENST00000534364 970 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC010198.2-201ENST00000550612 259 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 NUTF2P2-201ENST00000551207 384 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 MIR4642-201ENST00000583943 82 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC107982.3-201ENST00000584957 985 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC068802.1-201ENST00000603420 732 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AL031281.1-201ENST00000604049 488 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC104184.1-201ENST00000607513 721 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC108747.1-201ENST00000609508 535 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC027271.1-201ENST00000610270 610 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC107075.1-201ENST00000613695 314 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 MIR6754-201ENST00000621121 66 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AL357562.1-201ENST00000624911 609 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 SOCS5P5-201ENST00000402732 1586 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC073544.1-201ENST00000600110 1595 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC018765.1-201ENST00000623357 3446 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSU72Q9NP77 MROH3P-201ENST00000435735 2676 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AC091544.5-201ENST00000620192 3815 ntBASIC7.1□□□□□ -1.27
SSU72Q9NP77 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSU72Q9NP77 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.1□□□□□ -1.27
SSU72Q9NP77 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 HMGB1P10-201ENST00000395823 563 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 RNU2-16P-201ENST00000410712 136 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL663109.1-201ENST00000411498 844 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 UBTFL2-201ENST00000411859 1191 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 USP9YP33-201ENST00000412220 421 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 CENPN-204ENST00000428963 971 ntTSL 2 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 SNX18P14-201ENST00000429308 574 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 CLUHP5-201ENST00000438421 774 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SSU72Q9NP77 OR51B8P-201ENST00000449892 769 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 DBIL5P-202ENST00000453414 250 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AL109741.2-201ENST00000455561 343 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC016687.1-201ENST00000482574 353 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 MTAPP1-201ENST00000489154 819 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 OR7E157P-201ENST00000494376 911 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC092045.1-201ENST00000495716 1231 ntBASIC7.09□□□□□ -1.27
SSU72Q9NP77 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC7.09□□□□□ -1.27
SSU72Q9NP77 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms