Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 KHDC1P1-201ENST00000511053 508 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 RNA5SP418-201ENST00000515951 117 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AC008055.1-201ENST00000547032 609 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AC008555.7-201ENST00000605008 583 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CCDC28BQ9BUN5 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC28BQ9BUN5 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.9□□□□□ -1.47
CCDC28BQ9BUN5 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC28BQ9BUN5 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.9□□□□□ -1.47
CCDC28BQ9BUN5 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC28BQ9BUN5 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
CCDC28BQ9BUN5 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC28BQ9BUN5 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.9□□□□□ -1.47
CCDC28BQ9BUN5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 RNA5SP308-201ENST00000362532 115 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 RPL21P50-201ENST00000417698 477 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AL355994.1-201ENST00000424379 260 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AL121578.1-201ENST00000428051 892 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 OR52U1P-201ENST00000439752 923 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC023271.1-201ENST00000445936 1090 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC073072.2-201ENST00000447425 348 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 NPM1P19-201ENST00000450070 712 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 RBMY2EP-202ENST00000456360 940 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 RN7SL197P-201ENST00000466981 299 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 RN7SL836P-201ENST00000476140 296 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 RPS10P28-201ENST00000480396 498 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 PDCL3P4-201ENST00000489621 720 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 ASNSP4-201ENST00000511103 447 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 FTH1P11-201ENST00000517577 551 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC119403.2-201ENST00000590960 598 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 uc_338.33-201ENST00000614988 170 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC096708.4-201ENST00000620563 552 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC123912.3-201ENST00000600907 1367 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC024587.1-201ENST00000505925 2157 ntBASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC28BQ9BUN5 AP001029.2-203ENST00000589795 4910 ntBASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 AC005261.2-201ENST00000593427 4258 ntBASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 U3.7-201ENST00000363668 216 ntBASIC5.88□□□□□ -1.47
CCDC28BQ9BUN5 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms