Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TOPBP1Q92547 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOPBP1Q92547 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 RNA5SP333-201ENST00000363466 118 ntBASIC9.76□□□□□ -0.85
TOPBP1Q92547 RNA5SP334-201ENST00000364825 118 ntBASIC9.76□□□□□ -0.85
TOPBP1Q92547 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 DNAJA1P6-201ENST00000437347 354 ntBASIC9.76□□□□□ -0.85
TOPBP1Q92547 RPS23P9-201ENST00000448848 438 ntBASIC9.76□□□□□ -0.85
TOPBP1Q92547 RN7SL97P-201ENST00000486780 299 ntBASIC9.76□□□□□ -0.85
TOPBP1Q92547 OR51K1P-201ENST00000510214 950 ntBASIC9.76□□□□□ -0.85
TOPBP1Q92547 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 AC021678.3-201ENST00000517893 476 ntBASIC9.76□□□□□ -0.85
TOPBP1Q92547 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 AC012557.1-201ENST00000607115 611 ntBASIC9.76□□□□□ -0.85
TOPBP1Q92547 PACRG-210ENST00000611387 279 ntTSL 5 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 AC100827.5-201ENST00000615883 426 ntBASIC9.76□□□□□ -0.85
TOPBP1Q92547 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 FBXL21-201ENST00000297158 1305 ntBASIC9.75□□□□□ -0.85
TOPBP1Q92547 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 RNA5SP335-201ENST00000363817 110 ntBASIC9.75□□□□□ -0.85
TOPBP1Q92547 FAR2P2-201ENST00000413041 594 ntBASIC9.75□□□□□ -0.85
TOPBP1Q92547 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 FAR2P4-202ENST00000425399 584 ntBASIC9.75□□□□□ -0.85
TOPBP1Q92547 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 CR383656.6-201ENST00000550518 394 ntBASIC9.75□□□□□ -0.85
TOPBP1Q92547 OR4H6P-201ENST00000563771 921 ntBASIC9.75□□□□□ -0.85
TOPBP1Q92547 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 MIR4646-201ENST00000580775 63 ntBASIC9.75□□□□□ -0.85
TOPBP1Q92547 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC9.75□□□□□ -0.85
TOPBP1Q92547 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOPBP1Q92547 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 AL139128.1-201ENST00000413921 941 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 EIF4EBP2P1-201ENST00000450009 343 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 RAB28P2-201ENST00000454299 641 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 AC103563.5-201ENST00000455643 364 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 RPL7P45-201ENST00000455851 743 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 AC004129.2-201ENST00000457229 287 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 IGLV2-34-201ENST00000490007 283 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 RNU6ATAC24P-201ENST00000516811 135 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 AP002505.2-201ENST00000623585 696 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 AC132068.1-201ENST00000623805 459 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 AL591848.4-201ENST00000567832 3472 ntBASIC9.74□□□□□ -0.85
TOPBP1Q92547 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TOPBP1Q92547 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC9.74□□□□□ -0.85
TOPBP1Q92547 AC131971.1-201ENST00000332881 1482 ntBASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms