Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CDKL3Q8IVW4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.2□□□□□ -1.42
CDKL3Q8IVW4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDKL3Q8IVW4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CDKL3Q8IVW4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDKL3Q8IVW4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.2□□□□□ -1.42
CDKL3Q8IVW4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDKL3Q8IVW4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDKL3Q8IVW4 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDKL3Q8IVW4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 SNORA21-201ENST00000362423 132 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC017078.1-201ENST00000416146 368 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 Z82198.3-201ENST00000421145 199 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 RPL7AP51-201ENST00000422016 760 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC130360.1-201ENST00000425489 1117 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC099782.1-201ENST00000425889 474 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC092651.1-201ENST00000426110 312 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 RPL12P16-201ENST00000431098 498 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 ZNF619P1-201ENST00000446539 752 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC005017.1-201ENST00000482002 490 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 PPP1R11P1-201ENST00000486095 376 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC083795.1-201ENST00000491760 320 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AP002453.1-201ENST00000492327 668 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 CR383658.1-201ENST00000514609 734 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC130365.2-201ENST00000525882 1201 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC023389.2-201ENST00000580031 955 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AL645933.2-201ENST00000606743 1207 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AL135999.3-201ENST00000610501 812 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 uc_338.26-201ENST00000612659 160 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AL080312.2-201ENST00000613001 630 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC096861.1-201ENST00000616652 240 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AP000550.3-201ENST00000637734 379 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AP002512.4-202ENST00000641599 4530 ntBASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDKL3Q8IVW4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 RN7SKP184-201ENST00000362348 333 ntBASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 RNA5SP514-201ENST00000363717 111 ntBASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 RN7SKP146-201ENST00000410242 334 ntBASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 AC245096.1-201ENST00000413104 546 ntBASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 NMD3P2-201ENST00000421815 761 ntBASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 RPS27P20-201ENST00000492051 246 ntBASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 GUSBP9-201ENST00000510138 584 ntBASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 TOMM22P4-201ENST00000511318 336 ntBASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 RN7SKP288-201ENST00000516227 268 ntBASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 NPM1P42-201ENST00000560329 862 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms