Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC015689.2-201ENST00000528172 1738 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 MAPK10-270ENST00000641102 3538 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 WBP11P1-201ENST00000562560 1931 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC062029.1-202ENST00000606164 3651 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 SNORA21-201ENST00000362423 132 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 RNU1-134P-201ENST00000362935 165 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 TUBB4BP6-201ENST00000437576 479 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AL355355.1-201ENST00000442900 793 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 RPL36AP39-201ENST00000445859 318 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC002553.3-201ENST00000453002 341 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC023389.2-201ENST00000580031 955 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC090236.2-201ENST00000587933 1101 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AL157899.1-201ENST00000604110 936 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC108673.3-201ENST00000609183 335 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC004477.3-201ENST00000614061 590 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC073488.3-201ENST00000631611 778 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AC079776.5-201ENST00000641920 211 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 SHQ1P1-201ENST00000437111 1544 ntBASIC6.84□□□□□ -1.31
HERC6Q8IVU3 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HERC6Q8IVU3 AL359976.1-201ENST00000418655 3528 ntBASIC6.84□□□□□ -1.32
HERC6Q8IVU3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HERC6Q8IVU3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 UGT2B27P-201ENST00000505092 1620 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 ZNF658B-201ENST00000602828 3408 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 TMSB4XP2-201ENST00000335179 210 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 RNFT1P3-201ENST00000340898 1052 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 RN7SKP121-201ENST00000410842 305 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 RN7SKP286-201ENST00000410894 299 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AL121776.1-201ENST00000429337 372 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC124945.1-201ENST00000485133 188 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AL136038.1-201ENST00000497246 351 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 CR383658.1-201ENST00000514609 734 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 MIR4489-201ENST00000578869 62 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC090616.1-201ENST00000583895 447 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC022387.2-201ENST00000604050 448 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC025171.4-201ENST00000607250 1047 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC117490.2-201ENST00000610042 594 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AL352984.2-201ENST00000611153 546 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 OR1N1-202ENST00000619659 939 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AC104820.1-201ENST00000624183 307 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AL513548.1-201ENST00000562904 1724 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 LCOR-201ENST00000286067 4542 ntBASIC6.83□□□□□ -1.32
HERC6Q8IVU3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms