Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 UBE2NP1-201ENST00000545592 458 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC026111.1-201ENST00000551090 1195 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC093524.1-201ENST00000564266 1094 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 RN7SL376P-201ENST00000578594 264 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 NDUFA3P1-201ENST00000588007 252 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC073534.1-201ENST00000598671 1056 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 KC877982.1-201ENST00000602313 470 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC131159.2-201ENST00000613236 702 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AL589666.2-201ENST00000624603 618 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC073869.7-201ENST00000640874 297 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 DDX11L16-201ENST00000507418 1306 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC123769.2-201ENST00000624332 5984 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AL133268.1-201ENST00000405676 1401 ntBASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
FOXR1Q6PIV2 AC096745.2-201ENST00000627783 1914 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC127070.3-201ENST00000503695 3263 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC126773.4-201ENST00000612545 3043 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 SNORA71D-201ENST00000363484 134 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 RNU6-259P-201ENST00000383999 107 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 RPL17P50-201ENST00000396131 546 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 RPL36P18-201ENST00000419316 318 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AL049758.1-201ENST00000423154 397 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 USP9YP9-201ENST00000429406 715 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC000111.3-201ENST00000433478 193 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 WDR82P1-201ENST00000439836 939 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 MTCO3P18-201ENST00000440206 761 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 SNRPGP9-201ENST00000456025 225 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 OR11I1P-201ENST00000486033 954 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 RNA5SP303-201ENST00000516192 130 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC244034.2-201ENST00000562504 509 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC243312.1-201ENST00000570582 275 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 MIR4793-201ENST00000577502 87 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC093826.2-201ENST00000579042 108 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AL356986.1-201ENST00000604085 341 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AL392112.1-201ENST00000605115 829 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 702.5 ms