Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RN7SL717P-201ENST00000478343 297 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 SUMO2P7-201ENST00000511179 285 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 SCARNA21.2-201ENST00000516600 166 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 ZNF322P1-201ENST00000568013 1209 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 AC020916.2-201ENST00000591242 360 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 AC004477.3-201ENST00000614061 590 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 AC099654.11-201ENST00000638857 294 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 AC096921.2-201ENST00000561507 1916 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 AC027088.4-201ENST00000611559 1947 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 RBPJP7-201ENST00000442803 1447 ntBASIC7.09□□□□□ -1.28
SHROOM1Q2M3G4 RBPJP5-201ENST00000449433 1447 ntBASIC7.09□□□□□ -1.28
SHROOM1Q2M3G4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
SHROOM1Q2M3G4 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
SHROOM1Q2M3G4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
SHROOM1Q2M3G4 AC093829.1-201ENST00000506662 1618 ntBASIC7.09□□□□□ -1.28
SHROOM1Q2M3G4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 AP000547.3-204ENST00000588548 2523 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 RNU105B-201ENST00000364478 208 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 KIF4CP-201ENST00000422742 1279 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 BX119321.1-201ENST00000428912 797 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 TRIM60P16-201ENST00000444048 694 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 AC093166.4-201ENST00000457867 318 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 AC253576.1-201ENST00000511645 1156 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 SETP21-201ENST00000514799 892 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 RNA5SP400-201ENST00000517155 111 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 WBP1LP3-201ENST00000523033 208 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 AL356801.1-201ENST00000559320 294 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 OR8G3P-202ENST00000641572 1255 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 GNL2P1-201ENST00000451274 2190 ntBASIC7.08□□□□□ -1.28
SHROOM1Q2M3G4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 AC090220.1-201ENST00000593078 1699 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 SELENOWP1-201ENST00000322792 252 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 KATNBL1P2-201ENST00000433311 835 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 RNA5SP362-201ENST00000516048 118 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 AC112191.2-201ENST00000522428 333 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 GTF2IP11-201ENST00000526931 420 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 MIR4489-201ENST00000578869 62 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 AC015802.2-201ENST00000589690 189 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 AL021368.3-201ENST00000607119 578 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 uc_338.26-201ENST00000612659 160 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 AC011369.2-201ENST00000624423 1567 ntBASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SHROOM1Q2M3G4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHROOM1Q2M3G4 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms