Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.06□□□□□ -1.28
NEDD4P46934 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
NEDD4P46934 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.05□□□□□ -1.28
NEDD4P46934 BX284632.2-201ENST00000421091 399 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 RPL34P27-201ENST00000428810 349 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.05□□□□□ -1.28
NEDD4P46934 NDUFS5P5-201ENST00000437256 321 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 AL512605.1-202ENST00000441919 381 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 AL359955.2-201ENST00000445380 353 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.05□□□□□ -1.28
NEDD4P46934 AL359839.1-201ENST00000451975 1160 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.05□□□□□ -1.28
NEDD4P46934 NDUFA5P5-201ENST00000468361 342 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 AC023245.1-201ENST00000468501 517 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 RPL23AP40-201ENST00000487630 390 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 AC060775.1-201ENST00000518241 520 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 AP001804.1-201ENST00000526868 919 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.05□□□□□ -1.28
NEDD4P46934 AC005244.1-201ENST00000582566 339 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 AC067773.1-201ENST00000603284 1094 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.05□□□□□ -1.28
NEDD4P46934 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
NEDD4P46934 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.05□□□□□ -1.28
NEDD4P46934 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 AC079753.1-201ENST00000623243 3868 ntBASIC7.05□□□□□ -1.28
NEDD4P46934 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
NEDD4P46934 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.05□□□□□ -1.28
NEDD4P46934 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.05□□□□□ -1.28
NEDD4P46934 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.05□□□□□ -1.28
NEDD4P46934 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.05□□□□□ -1.28
NEDD4P46934 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NEDD4P46934 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NEDD4P46934 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NEDD4P46934 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NEDD4P46934 RNU1-150P-201ENST00000362491 162 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 RNA5SP500-201ENST00000364486 119 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NEDD4P46934 SUGT1P2-201ENST00000379452 992 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.04□□□□□ -1.28
NEDD4P46934 RPL23AP18-201ENST00000416139 468 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.04□□□□□ -1.28
NEDD4P46934 BX323845.3-201ENST00000428215 527 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.04□□□□□ -1.28
NEDD4P46934 PCBP2P1-201ENST00000437262 977 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 ACA64.4-201ENST00000459070 127 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 AC083795.1-201ENST00000491760 320 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 SUMO2P19-201ENST00000518920 295 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 AP003396.4-201ENST00000527574 265 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.04□□□□□ -1.28
NEDD4P46934 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.04□□□□□ -1.28
NEDD4P46934 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.04□□□□□ -1.28
NEDD4P46934 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.04□□□□□ -1.28
NEDD4P46934 MIR4776-2-201ENST00000580204 80 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.04□□□□□ -1.28
NEDD4P46934 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.04□□□□□ -1.28
NEDD4P46934 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.04□□□□□ -1.28
NEDD4P46934 AL352984.2-202ENST00000613699 155 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.04□□□□□ -1.28
NEDD4P46934 AC110716.2-201ENST00000563865 3945 ntBASIC7.04□□□□□ -1.28
NEDD4P46934 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEDD4P46934 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEDD4P46934 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEDD4P46934 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEDD4P46934 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEDD4P46934 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NEDD4P46934 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.04□□□□□ -1.28
NEDD4P46934 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEDD4P46934 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
NEDD4P46934 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.03□□□□□ -1.28
NEDD4P46934 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.03□□□□□ -1.28
NEDD4P46934 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.03□□□□□ -1.28
NEDD4P46934 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.03□□□□□ -1.28
NEDD4P46934 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.03□□□□□ -1.28
NEDD4P46934 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.03□□□□□ -1.28
NEDD4P46934 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
NEDD4P46934 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NEDD4P46934 AC092651.1-201ENST00000426110 312 ntBASIC7.03□□□□□ -1.28
NEDD4P46934 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.03□□□□□ -1.28
NEDD4P46934 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.03□□□□□ -1.28
NEDD4P46934 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.03□□□□□ -1.28
NEDD4P46934 AC093166.4-201ENST00000457867 318 ntBASIC7.03□□□□□ -1.28
NEDD4P46934 AL355032.1-201ENST00000472981 438 ntBASIC7.03□□□□□ -1.28
NEDD4P46934 AC092865.4-201ENST00000477936 615 ntBASIC7.03□□□□□ -1.28
NEDD4P46934 RPL38P3-201ENST00000484463 213 ntBASIC7.03□□□□□ -1.28
NEDD4P46934 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms