Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 ZNF252P-208ENST00000592792 2485 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AC009831.5-201ENST00000624000 3189 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 NAP1L3-202ENST00000475430 2555 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 AL133492.1-201ENST00000617854 3955 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 RBMX2P2-201ENST00000257020 946 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 RNU6-462P-201ENST00000362659 105 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
COL9A1P20849 MED28P1-201ENST00000399158 571 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AL138807.1-201ENST00000400354 459 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 AL162578.1-201ENST00000406202 378 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 HYKK-202ENST00000408962 847 ntTSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 MTND3P8-201ENST00000412909 339 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 ATP5HP4-201ENST00000414313 475 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 ELOCP4-201ENST00000420090 333 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 BEND7P1-201ENST00000422058 457 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 AL031733.1-201ENST00000422817 455 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.58□□□□□ -1.04
COL9A1P20849 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 AC097527.1-201ENST00000437031 530 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC8.58□□□□□ -1.04
COL9A1P20849 U8.20-201ENST00000459445 131 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8.58□□□□□ -1.04
COL9A1P20849 RPS4XP17-201ENST00000479057 754 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 RN7SL283P-201ENST00000489055 303 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AC080188.1-201ENST00000491923 567 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 AC021220.1-201ENST00000507445 630 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 CDC42P3-201ENST00000518493 633 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AC083923.1-201ENST00000523708 376 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.58□□□□□ -1.04
COL9A1P20849 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC8.58□□□□□ -1.04
COL9A1P20849 AC023310.2-201ENST00000553844 547 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AL591767.2-201ENST00000554984 173 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.58□□□□□ -1.04
COL9A1P20849 HYKK-203ENST00000563233 734 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 ZNF322P1-201ENST00000568013 1209 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 MIR4642-201ENST00000583943 82 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 AL137190.1-201ENST00000603288 282 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AC113361.1-201ENST00000606683 543 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AL627309.6-201ENST00000606857 840 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AC104010.1-201ENST00000616889 150 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 AL049541.2-201ENST00000626377 555 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
COL9A1P20849 OIT3-201ENST00000334011 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 FAM13A-213ENST00000509094 2762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC8.58□□□□□ -1.04
COL9A1P20849 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 EEF1A1P10-201ENST00000475365 1390 ntBASIC8.58□□□□□ -1.04
COL9A1P20849 ST5-213ENST00000526757 3019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 LINC02181-201ENST00000430050 4083 ntTSL 2 BASIC8.58□□□□□ -1.04
COL9A1P20849 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.58□□□□□ -1.04
COL9A1P20849 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
COL9A1P20849 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC8.57□□□□□ -1.04
COL9A1P20849 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 AC010533.1-201ENST00000624875 2105 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 MYRIP-210ENST00000539167 4635 ntTSL 2 BASIC8.57□□□□□ -1.04
COL9A1P20849 ZNF840P-201ENST00000504759 1996 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC8.57□□□□□ -1.04
COL9A1P20849 AC007923.2-201ENST00000584218 1591 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC8.57□□□□□ -1.04
COL9A1P20849 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.57□□□□□ -1.04
COL9A1P20849 AC068733.2-201ENST00000605434 1418 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms