Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 AP000432.2-201ENST00000624164 2048 ntBASIC5.64□□□□□ -1.51
NCK1P16333 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.64□□□□□ -1.51
NCK1P16333 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.64□□□□□ -1.51
NCK1P16333 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 VIM2P-201ENST00000402383 1294 ntBASIC5.64□□□□□ -1.51
NCK1P16333 METTL15P3-201ENST00000415522 1221 ntBASIC5.64□□□□□ -1.51
NCK1P16333 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.64□□□□□ -1.51
NCK1P16333 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.64□□□□□ -1.51
NCK1P16333 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 RPS15AP30-201ENST00000420976 390 ntBASIC5.64□□□□□ -1.51
NCK1P16333 OSTCP4-201ENST00000424397 449 ntBASIC5.64□□□□□ -1.51
NCK1P16333 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.64□□□□□ -1.51
NCK1P16333 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 AL645939.3-201ENST00000435408 225 ntBASIC5.64□□□□□ -1.51
NCK1P16333 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NCK1P16333 CXCR2P1-202ENST00000443392 1074 ntBASIC5.64□□□□□ -1.51
NCK1P16333 AL133480.2-201ENST00000456723 487 ntBASIC5.64□□□□□ -1.51
NCK1P16333 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.64□□□□□ -1.51
NCK1P16333 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.64□□□□□ -1.51
NCK1P16333 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.64□□□□□ -1.51
NCK1P16333 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.64□□□□□ -1.51
NCK1P16333 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.64□□□□□ -1.51
NCK1P16333 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.64□□□□□ -1.51
NCK1P16333 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.64□□□□□ -1.51
NCK1P16333 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.64□□□□□ -1.51
NCK1P16333 AC119403.2-201ENST00000590960 598 ntBASIC5.64□□□□□ -1.51
NCK1P16333 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.64□□□□□ -1.51
NCK1P16333 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.64□□□□□ -1.51
NCK1P16333 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.64□□□□□ -1.51
NCK1P16333 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NCK1P16333 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.64□□□□□ -1.51
NCK1P16333 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NCK1P16333 PPBPP2-201ENST00000513150 1362 ntBASIC5.64□□□□□ -1.51
NCK1P16333 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NCK1P16333 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.64□□□□□ -1.51
NCK1P16333 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NCK1P16333 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 AL355488.2-201ENST00000609909 2850 ntBASIC5.63□□□□□ -1.51
NCK1P16333 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
NCK1P16333 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
NCK1P16333 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NCK1P16333 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 MRPL32P1-201ENST00000406301 247 ntBASIC5.63□□□□□ -1.51
NCK1P16333 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NCK1P16333 MYL6P5-201ENST00000412707 459 ntBASIC5.63□□□□□ -1.51
NCK1P16333 AL138479.1-201ENST00000426913 484 ntBASIC5.63□□□□□ -1.51
NCK1P16333 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.63□□□□□ -1.51
NCK1P16333 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.63□□□□□ -1.51
NCK1P16333 HIGD1AP16-201ENST00000450986 258 ntBASIC5.63□□□□□ -1.51
NCK1P16333 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.63□□□□□ -1.51
NCK1P16333 FRG2FP-204ENST00000453982 852 ntBASIC5.63□□□□□ -1.51
NCK1P16333 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.63□□□□□ -1.51
NCK1P16333 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.63□□□□□ -1.51
NCK1P16333 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.63□□□□□ -1.51
NCK1P16333 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.63□□□□□ -1.51
NCK1P16333 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.63□□□□□ -1.51
NCK1P16333 AC090424.1-201ENST00000535243 736 ntBASIC5.63□□□□□ -1.51
NCK1P16333 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.63□□□□□ -1.51
NCK1P16333 AC126615.2-201ENST00000553003 515 ntBASIC5.63□□□□□ -1.51
NCK1P16333 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.63□□□□□ -1.51
NCK1P16333 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.63□□□□□ -1.51
NCK1P16333 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.63□□□□□ -1.51
NCK1P16333 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
NCK1P16333 AC007346.2-201ENST00000564816 892 ntBASIC5.63□□□□□ -1.51
NCK1P16333 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
NCK1P16333 AC091304.5-201ENST00000568969 158 ntBASIC5.63□□□□□ -1.51
NCK1P16333 AC090826.1-203ENST00000569235 490 ntBASIC5.63□□□□□ -1.51
NCK1P16333 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.63□□□□□ -1.51
NCK1P16333 AC009120.7-201ENST00000623452 780 ntBASIC5.63□□□□□ -1.51
NCK1P16333 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.63□□□□□ -1.51
NCK1P16333 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NCK1P16333 AC079776.5-201ENST00000641920 211 ntBASIC5.63□□□□□ -1.51
NCK1P16333 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NCK1P16333 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NCK1P16333 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCK1P16333 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.63□□□□□ -1.51
NCK1P16333 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms