Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SUMO2P15-201ENST00000604285 278 ntBASIC6.71□□□□□ -1.34
COL11A1P12107 AP000864.1-201ENST00000609424 650 ntBASIC6.71□□□□□ -1.34
COL11A1P12107 MARK2P4-201ENST00000503381 2380 ntBASIC6.71□□□□□ -1.34
COL11A1P12107 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
COL11A1P12107 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
COL11A1P12107 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
COL11A1P12107 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
COL11A1P12107 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 PABPC1P6-201ENST00000445594 1829 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.7□□□□□ -1.34
COL11A1P12107 AC114786.1-201ENST00000512892 1415 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 AL353626.3-201ENST00000413399 657 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 AC019205.1-201ENST00000421830 730 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 YWHAEP1-201ENST00000453697 763 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.7□□□□□ -1.34
COL11A1P12107 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.7□□□□□ -1.34
COL11A1P12107 AC074087.1-201ENST00000512059 724 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.7□□□□□ -1.34
COL11A1P12107 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.7□□□□□ -1.34
COL11A1P12107 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.7□□□□□ -1.34
COL11A1P12107 AC137695.1-201ENST00000604126 489 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 AC091193.1-201ENST00000604640 448 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
COL11A1P12107 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
COL11A1P12107 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.7□□□□□ -1.34
COL11A1P12107 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.7□□□□□ -1.34
COL11A1P12107 SRRM1P3-201ENST00000426911 2678 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL11A1P12107 AC022034.1-201ENST00000512867 2156 ntBASIC6.7□□□□□ -1.34
COL11A1P12107 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
COL11A1P12107 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
COL11A1P12107 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 AC061975.7-201ENST00000592016 2692 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 YES1P1-201ENST00000418510 1628 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 RNA5SP131-201ENST00000365452 119 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
COL11A1P12107 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
COL11A1P12107 MRPL53P1-201ENST00000414323 319 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 OR7E116P-201ENST00000448529 957 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 LRRC37A14P-201ENST00000452297 462 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.69□□□□□ -1.34
COL11A1P12107 RN7SL222P-201ENST00000476452 299 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 RPL38P3-201ENST00000484463 213 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 RPL23AP40-201ENST00000487630 390 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.69□□□□□ -1.34
COL11A1P12107 AC007494.1-201ENST00000562293 760 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 AC096996.1-201ENST00000563813 325 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
COL11A1P12107 MIR132-201ENST00000591554 101 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
COL11A1P12107 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
COL11A1P12107 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.69□□□□□ -1.34
COL11A1P12107 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
COL11A1P12107 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.69□□□□□ -1.34
COL11A1P12107 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL11A1P12107 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
COL11A1P12107 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL11A1P12107 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
COL11A1P12107 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
COL11A1P12107 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.69□□□□□ -1.34
COL11A1P12107 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.69□□□□□ -1.34
COL11A1P12107 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.69□□□□□ -1.34
COL11A1P12107 MIR130A-201ENST00000385274 89 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.69□□□□□ -1.34
COL11A1P12107 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.69□□□□□ -1.34
COL11A1P12107 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
COL11A1P12107 RPS17P15-201ENST00000475609 349 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.69□□□□□ -1.34
COL11A1P12107 MRPS16P1-201ENST00000523462 412 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 AC018445.2-201ENST00000622987 260 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 AL390318.1-201ENST00000624564 687 ntBASIC6.69□□□□□ -1.34
COL11A1P12107 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.69□□□□□ -1.34
COL11A1P12107 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
COL11A1P12107 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
COL11A1P12107 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL11A1P12107 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms