Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
APOEP02649 RFPL4AP6-201ENST00000616792 846 ntBASIC6.42□□□□□ -1.38
APOEP02649 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 AP002512.4-202ENST00000641599 4530 ntBASIC6.42□□□□□ -1.38
APOEP02649 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
APOEP02649 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
APOEP02649 AL591135.1-201ENST00000401578 5914 ntBASIC6.41□□□□□ -1.38
APOEP02649 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
APOEP02649 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
APOEP02649 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.41□□□□□ -1.38
APOEP02649 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
APOEP02649 AC018717.1-201ENST00000457712 1505 ntBASIC6.41□□□□□ -1.38
APOEP02649 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
APOEP02649 IMMTP1-201ENST00000435590 2219 ntBASIC6.41□□□□□ -1.38
APOEP02649 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.41□□□□□ -1.38
APOEP02649 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
APOEP02649 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
APOEP02649 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
APOEP02649 HSPD1P9-201ENST00000420325 1636 ntBASIC6.41□□□□□ -1.38
APOEP02649 RN7SKP186-201ENST00000365371 303 ntBASIC6.41□□□□□ -1.38
APOEP02649 RNA5SP431-201ENST00000410312 120 ntBASIC6.41□□□□□ -1.38
APOEP02649 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.41□□□□□ -1.38
APOEP02649 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.41□□□□□ -1.38
APOEP02649 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.41□□□□□ -1.38
APOEP02649 RPL6P30-201ENST00000443382 862 ntBASIC6.41□□□□□ -1.38
APOEP02649 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.41□□□□□ -1.38
APOEP02649 AC002553.3-201ENST00000453002 341 ntBASIC6.41□□□□□ -1.38
APOEP02649 PPIAP7-201ENST00000454070 489 ntBASIC6.41□□□□□ -1.38
APOEP02649 AC114728.1-201ENST00000488289 483 ntBASIC6.41□□□□□ -1.38
APOEP02649 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.41□□□□□ -1.38
APOEP02649 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.41□□□□□ -1.38
APOEP02649 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.41□□□□□ -1.38
APOEP02649 AP000620.1-201ENST00000527147 504 ntBASIC6.41□□□□□ -1.38
APOEP02649 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.41□□□□□ -1.38
APOEP02649 OR4A6P-201ENST00000534364 970 ntBASIC6.41□□□□□ -1.38
APOEP02649 AC006512.2-201ENST00000543250 486 ntBASIC6.41□□□□□ -1.38
APOEP02649 AP000619.2-201ENST00000546014 969 ntBASIC6.41□□□□□ -1.38
APOEP02649 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.41□□□□□ -1.38
APOEP02649 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.41□□□□□ -1.38
APOEP02649 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.41□□□□□ -1.38
APOEP02649 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.41□□□□□ -1.38
APOEP02649 NPIPB1P-202ENST00000588786 828 ntBASIC6.41□□□□□ -1.38
APOEP02649 AC125494.2-201ENST00000602431 657 ntBASIC6.41□□□□□ -1.38
APOEP02649 AL583832.1-201ENST00000603227 784 ntBASIC6.41□□□□□ -1.38
APOEP02649 AC008555.7-201ENST00000605008 583 ntBASIC6.41□□□□□ -1.38
APOEP02649 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.41□□□□□ -1.38
APOEP02649 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.41□□□□□ -1.38
APOEP02649 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.41□□□□□ -1.38
APOEP02649 AC116667.2-201ENST00000641075 823 ntBASIC6.41□□□□□ -1.38
APOEP02649 OR7A1P-202ENST00000641542 1158 ntBASIC6.41□□□□□ -1.38
APOEP02649 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
APOEP02649 CCNT2P1-201ENST00000423082 1315 ntBASIC6.41□□□□□ -1.38
APOEP02649 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
APOEP02649 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.41□□□□□ -1.38
APOEP02649 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
APOEP02649 AL592429.1-201ENST00000403909 1473 ntBASIC6.41□□□□□ -1.38
APOEP02649 AC104966.1-201ENST00000467010 1464 ntBASIC6.41□□□□□ -1.38
APOEP02649 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
APOEP02649 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
APOEP02649 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
APOEP02649 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.4□□□□□ -1.38
APOEP02649 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
APOEP02649 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.4□□□□□ -1.38
APOEP02649 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
APOEP02649 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.4□□□□□ -1.38
APOEP02649 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.4□□□□□ -1.38
APOEP02649 AL359091.1-201ENST00000449048 1734 ntBASIC6.4□□□□□ -1.38
APOEP02649 AC011416.1-201ENST00000514947 1732 ntBASIC6.4□□□□□ -1.38
APOEP02649 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
APOEP02649 USP9YP3-201ENST00000434481 1766 ntBASIC6.4□□□□□ -1.38
APOEP02649 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
APOEP02649 SNORA21-201ENST00000362423 132 ntBASIC6.4□□□□□ -1.38
APOEP02649 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.4□□□□□ -1.38
APOEP02649 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.4□□□□□ -1.38
APOEP02649 AL132875.1-201ENST00000403623 949 ntBASIC6.4□□□□□ -1.38
APOEP02649 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.4□□□□□ -1.38
APOEP02649 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.4□□□□□ -1.38
APOEP02649 AC097463.1-201ENST00000447288 481 ntBASIC6.4□□□□□ -1.38
APOEP02649 SLC25A51P1-201ENST00000468432 871 ntBASIC6.4□□□□□ -1.38
APOEP02649 OR7E99P-201ENST00000505750 922 ntBASIC6.4□□□□□ -1.38
APOEP02649 PRMT5P1-201ENST00000514351 598 ntBASIC6.4□□□□□ -1.38
APOEP02649 RN7SKP70-201ENST00000516655 271 ntBASIC6.4□□□□□ -1.38
APOEP02649 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.4□□□□□ -1.38
APOEP02649 AC009879.1-201ENST00000520029 839 ntBASIC6.4□□□□□ -1.38
APOEP02649 AC021269.1-201ENST00000526860 705 ntBASIC6.4□□□□□ -1.38
APOEP02649 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.4□□□□□ -1.38
APOEP02649 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.4□□□□□ -1.38
APOEP02649 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.4□□□□□ -1.38
APOEP02649 GLYATL1P2-202ENST00000588046 902 ntBASIC6.4□□□□□ -1.38
APOEP02649 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.4□□□□□ -1.38
APOEP02649 AC073333.2-201ENST00000603589 769 ntBASIC6.4□□□□□ -1.38
APOEP02649 AL512652.1-201ENST00000619006 500 ntBASIC6.4□□□□□ -1.38
APOEP02649 AL137067.2-201ENST00000621202 131 ntBASIC6.4□□□□□ -1.38
APOEP02649 AC003992.1-201ENST00000635364 557 ntBASIC6.4□□□□□ -1.38
APOEP02649 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.4□□□□□ -1.38
APOEP02649 AP001153.1-201ENST00000641024 338 ntBASIC6.4□□□□□ -1.38
APOEP02649 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms