Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
TNFP01375 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.92□□□□□ -1.46
TNFP01375 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.92□□□□□ -1.46
TNFP01375 AC068138.1-201ENST00000412635 217 ntBASIC5.92□□□□□ -1.46
TNFP01375 EEF1B2P8-201ENST00000414101 671 ntBASIC5.92□□□□□ -1.46
TNFP01375 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.92□□□□□ -1.46
TNFP01375 RPL35AP3-201ENST00000414680 288 ntBASIC5.92□□□□□ -1.46
TNFP01375 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.92□□□□□ -1.46
TNFP01375 NAP1L4P2-201ENST00000425958 899 ntBASIC5.92□□□□□ -1.46
TNFP01375 AC104843.2-201ENST00000427666 297 ntBASIC5.92□□□□□ -1.46
TNFP01375 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.92□□□□□ -1.46
TNFP01375 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.92□□□□□ -1.46
TNFP01375 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.92□□□□□ -1.46
TNFP01375 AP006222.1-205ENST00000450734 457 ntBASIC5.92□□□□□ -1.46
TNFP01375 GEMIN2P1-201ENST00000454246 752 ntBASIC5.92□□□□□ -1.46
TNFP01375 RN7SL269P-201ENST00000467795 305 ntBASIC5.92□□□□□ -1.46
TNFP01375 AC023245.1-201ENST00000468501 517 ntBASIC5.92□□□□□ -1.46
TNFP01375 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
TNFP01375 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TNFP01375 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.92□□□□□ -1.46
TNFP01375 AP000648.1-201ENST00000529682 397 ntBASIC5.92□□□□□ -1.46
TNFP01375 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.92□□□□□ -1.46
TNFP01375 AC079600.1-201ENST00000550326 297 ntBASIC5.92□□□□□ -1.46
TNFP01375 DPPA3P2-201ENST00000553589 478 ntBASIC5.92□□□□□ -1.46
TNFP01375 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.92□□□□□ -1.46
TNFP01375 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.92□□□□□ -1.46
TNFP01375 AL031601.1-201ENST00000605702 394 ntBASIC5.92□□□□□ -1.46
TNFP01375 AL512356.3-201ENST00000623005 461 ntBASIC5.92□□□□□ -1.46
TNFP01375 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.92□□□□□ -1.46
TNFP01375 AC087269.2-201ENST00000641764 975 ntBASIC5.92□□□□□ -1.46
TNFP01375 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TNFP01375 AL137141.1-201ENST00000624622 4836 ntBASIC5.92□□□□□ -1.46
TNFP01375 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
TNFP01375 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TNFP01375 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TNFP01375 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.91□□□□□ -1.46
TNFP01375 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TNFP01375 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.91□□□□□ -1.46
TNFP01375 WDR95P-201ENST00000425638 1542 ntBASIC5.91□□□□□ -1.46
TNFP01375 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.91□□□□□ -1.46
TNFP01375 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TNFP01375 RN7SKP128-201ENST00000364270 303 ntBASIC5.91□□□□□ -1.46
TNFP01375 AL096800.1-201ENST00000405326 893 ntBASIC5.91□□□□□ -1.46
TNFP01375 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.91□□□□□ -1.46
TNFP01375 PPIAP20-201ENST00000449839 135 ntBASIC5.91□□□□□ -1.46
TNFP01375 AC112187.1-201ENST00000455837 479 ntBASIC5.91□□□□□ -1.46
TNFP01375 AC018638.3-201ENST00000461273 132 ntBASIC5.91□□□□□ -1.46
TNFP01375 PPIAP19-201ENST00000486414 492 ntBASIC5.91□□□□□ -1.46
TNFP01375 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TNFP01375 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.91□□□□□ -1.46
TNFP01375 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.91□□□□□ -1.46
TNFP01375 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.91□□□□□ -1.46
TNFP01375 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TNFP01375 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TNFP01375 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.91□□□□□ -1.46
TNFP01375 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.91□□□□□ -1.46
TNFP01375 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.91□□□□□ -1.46
TNFP01375 OR4H6P-201ENST00000563771 921 ntBASIC5.91□□□□□ -1.46
TNFP01375 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.91□□□□□ -1.46
TNFP01375 ZNF322P1-201ENST00000568013 1209 ntBASIC5.91□□□□□ -1.46
TNFP01375 AC011497.2-201ENST00000600255 639 ntBASIC5.91□□□□□ -1.46
TNFP01375 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.91□□□□□ -1.46
TNFP01375 AL049840.6-201ENST00000604583 345 ntBASIC5.91□□□□□ -1.46
TNFP01375 AC127024.6-201ENST00000621598 424 ntBASIC5.91□□□□□ -1.46
TNFP01375 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.91□□□□□ -1.46
TNFP01375 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TNFP01375 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TNFP01375 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.91□□□□□ -1.46
TNFP01375 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TNFP01375 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TNFP01375 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TNFP01375 Z93929.1-201ENST00000418200 1475 ntBASIC5.9□□□□□ -1.46
TNFP01375 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TNFP01375 AC110373.1-201ENST00000505994 3505 ntBASIC5.9□□□□□ -1.46
TNFP01375 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TNFP01375 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TNFP01375 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.9□□□□□ -1.46
TNFP01375 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.9□□□□□ -1.46
TNFP01375 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
TNFP01375 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TNFP01375 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
TNFP01375 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.9□□□□□ -1.46
TNFP01375 RNA5SP284-201ENST00000384547 118 ntBASIC5.9□□□□□ -1.46
TNFP01375 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.9□□□□□ -1.46
TNFP01375 AL354890.1-201ENST00000413730 346 ntBASIC5.9□□□□□ -1.46
TNFP01375 RPS14P4-201ENST00000415880 418 ntBASIC5.9□□□□□ -1.46
TNFP01375 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.9□□□□□ -1.46
TNFP01375 MTND6P12-201ENST00000428247 522 ntBASIC5.9□□□□□ -1.46
TNFP01375 RPL12P16-201ENST00000431098 498 ntBASIC5.9□□□□□ -1.46
TNFP01375 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.9□□□□□ -1.46
TNFP01375 BMS1P10-201ENST00000443754 1120 ntBASIC5.9□□□□□ -1.46
TNFP01375 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.9□□□□□ -1.46
TNFP01375 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.9□□□□□ -1.46
TNFP01375 NXT1P1-201ENST00000458481 316 ntBASIC5.9□□□□□ -1.46
TNFP01375 RPL23AP40-201ENST00000487630 390 ntBASIC5.9□□□□□ -1.46
TNFP01375 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.9□□□□□ -1.46
TNFP01375 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TNFP01375 RN7SKP98-201ENST00000517070 156 ntBASIC5.9□□□□□ -1.46
TNFP01375 TPM3P3-201ENST00000521343 354 ntBASIC5.9□□□□□ -1.46
TNFP01375 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms