Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC007494.3-201ENST00000624660 743 ntBASIC7.58□□□□□ -1.2
SOX1O00570 AC068137.3-201ENST00000639191 341 ntBASIC7.58□□□□□ -1.2
SOX1O00570 AC073869.6-201ENST00000640656 341 ntBASIC7.58□□□□□ -1.2
SOX1O00570 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 AL008638.3-201ENST00000623027 5182 ntBASIC7.58□□□□□ -1.2
SOX1O00570 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 AC126773.4-201ENST00000612545 3043 ntBASIC7.58□□□□□ -1.2
SOX1O00570 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 OR4G1P-202ENST00000641173 1788 ntBASIC7.58□□□□□ -1.2
SOX1O00570 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC7.58□□□□□ -1.2
SOX1O00570 XRCC6P4-201ENST00000518193 2067 ntBASIC7.58□□□□□ -1.2
SOX1O00570 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.58□□□□□ -1.2
SOX1O00570 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX1O00570 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX1O00570 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX1O00570 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.57□□□□□ -1.2
SOX1O00570 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 AL353795.1-201ENST00000439134 1775 ntBASIC7.57□□□□□ -1.2
SOX1O00570 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 SNORA58B-201ENST00000364259 136 ntBASIC7.57□□□□□ -1.2
SOX1O00570 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SOX1O00570 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX1O00570 MIR188-201ENST00000385034 86 ntBASIC7.57□□□□□ -1.2
SOX1O00570 ATF1P1-201ENST00000406040 927 ntBASIC7.57□□□□□ -1.2
SOX1O00570 MIR1178-201ENST00000408396 91 ntBASIC7.57□□□□□ -1.2
SOX1O00570 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX1O00570 RPL7P53-201ENST00000421245 739 ntBASIC7.57□□□□□ -1.2
SOX1O00570 AC246680.2-201ENST00000422106 389 ntBASIC7.57□□□□□ -1.2
SOX1O00570 AC244035.1-201ENST00000430042 390 ntBASIC7.57□□□□□ -1.2
SOX1O00570 AL365220.1-201ENST00000432923 399 ntBASIC7.57□□□□□ -1.2
SOX1O00570 RPS24P1-201ENST00000438550 371 ntBASIC7.57□□□□□ -1.2
SOX1O00570 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.57□□□□□ -1.2
SOX1O00570 AL512326.1-201ENST00000443050 721 ntBASIC7.57□□□□□ -1.2
SOX1O00570 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX1O00570 AL627224.1-201ENST00000448334 444 ntBASIC7.57□□□□□ -1.2
SOX1O00570 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX1O00570 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.57□□□□□ -1.2
SOX1O00570 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX1O00570 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX1O00570 OR5H4P-201ENST00000510851 923 ntBASIC7.57□□□□□ -1.2
SOX1O00570 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX1O00570 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.57□□□□□ -1.2
SOX1O00570 TRIM77BP-201ENST00000524985 1119 ntBASIC7.57□□□□□ -1.2
SOX1O00570 OR4A40P-201ENST00000533878 948 ntBASIC7.57□□□□□ -1.2
SOX1O00570 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX1O00570 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX1O00570 MTCO3P24-201ENST00000572729 782 ntBASIC7.57□□□□□ -1.2
SOX1O00570 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.57□□□□□ -1.2
SOX1O00570 AP001269.3-201ENST00000588718 329 ntBASIC7.57□□□□□ -1.2
SOX1O00570 NPIPB1P-202ENST00000588786 828 ntBASIC7.57□□□□□ -1.2
SOX1O00570 AC073137.1-201ENST00000605636 634 ntBASIC7.57□□□□□ -1.2
SOX1O00570 AC131235.4-201ENST00000609288 620 ntBASIC7.57□□□□□ -1.2
SOX1O00570 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX1O00570 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.57□□□□□ -1.2
SOX1O00570 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX1O00570 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX1O00570 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 AC073349.2-201ENST00000427545 1603 ntBASIC7.56□□□□□ -1.2
SOX1O00570 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX1O00570 Z97832.2-201ENST00000605896 4261 ntBASIC7.56□□□□□ -1.2
SOX1O00570 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.56□□□□□ -1.2
SOX1O00570 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 AL049776.1-201ENST00000624600 2025 ntBASIC7.56□□□□□ -1.2
SOX1O00570 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SOX1O00570 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX1O00570 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SOX1O00570 AC078795.1-201ENST00000602342 3143 ntBASIC7.56□□□□□ -1.2
SOX1O00570 RNA5SP140-201ENST00000364524 92 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms