Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
UPK1AO00322 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
UPK1AO00322 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 RNA5SP110-201ENST00000362638 115 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.7□□□□□ -1.5
UPK1AO00322 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
UPK1AO00322 RNA5SP156-201ENST00000410250 110 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.7□□□□□ -1.5
UPK1AO00322 RPL7AP14-201ENST00000424041 802 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.7□□□□□ -1.5
UPK1AO00322 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.7□□□□□ -1.5
UPK1AO00322 AC002075.1-201ENST00000457396 676 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.7□□□□□ -1.5
UPK1AO00322 AP003033.2-201ENST00000528901 805 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 OR4A41P-201ENST00000533053 928 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.7□□□□□ -1.5
UPK1AO00322 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.7□□□□□ -1.5
UPK1AO00322 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.7□□□□□ -1.5
UPK1AO00322 AC121758.1-202ENST00000556917 658 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.7□□□□□ -1.5
UPK1AO00322 MIR4701-201ENST00000583094 63 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.7□□□□□ -1.5
UPK1AO00322 RNA5SP439-201ENST00000617595 124 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 AC099654.15-201ENST00000639802 509 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
UPK1AO00322 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
UPK1AO00322 AC123769.1-201ENST00000530992 3192 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
UPK1AO00322 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
UPK1AO00322 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPK1AO00322 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPK1AO00322 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.69□□□□□ -1.5
UPK1AO00322 AL031123.3-201ENST00000623345 1837 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.69□□□□□ -1.5
UPK1AO00322 AC109446.4-201ENST00000623235 2755 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.69□□□□□ -1.5
UPK1AO00322 SNORA21-201ENST00000362423 132 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 RNA5SP453-201ENST00000362503 119 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 RNU105B-201ENST00000364478 208 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 YWHAZP6-201ENST00000399764 738 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.69□□□□□ -1.5
UPK1AO00322 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.69□□□□□ -1.5
UPK1AO00322 RPS15AP30-201ENST00000420976 390 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 AC092865.3-201ENST00000425390 1026 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.69□□□□□ -1.5
UPK1AO00322 BX276092.6-201ENST00000430476 250 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.69□□□□□ -1.5
UPK1AO00322 GAPDHP59-201ENST00000435908 267 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.69□□□□□ -1.5
UPK1AO00322 AC010240.2-201ENST00000445363 1205 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.69□□□□□ -1.5
UPK1AO00322 BX276092.8-201ENST00000455722 250 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 RN7SL362P-201ENST00000494228 267 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 AC113367.2-201ENST00000505749 160 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 RNA5SP441-201ENST00000516809 88 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.69□□□□□ -1.5
UPK1AO00322 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.69□□□□□ -1.5
UPK1AO00322 AC138207.8-204ENST00000579588 527 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.69□□□□□ -1.5
UPK1AO00322 AL355974.3-201ENST00000617383 467 ntBASIC5.69□□□□□ -1.5
UPK1AO00322 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPK1AO00322 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
UPK1AO00322 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPK1AO00322 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPK1AO00322 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
UPK1AO00322 AC119674.1-202ENST00000641333 1860 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.68□□□□□ -1.5
UPK1AO00322 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.68□□□□□ -1.5
UPK1AO00322 SAMM50P1-201ENST00000455403 1399 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.68□□□□□ -1.5
UPK1AO00322 AC016583.1-201ENST00000624221 2431 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPK1AO00322 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
UPK1AO00322 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPK1AO00322 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPK1AO00322 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
UPK1AO00322 AL096829.1-201ENST00000413677 457 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.68□□□□□ -1.5
UPK1AO00322 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 AC108479.1-201ENST00000431142 427 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.68□□□□□ -1.5
UPK1AO00322 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.68□□□□□ -1.5
UPK1AO00322 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.68□□□□□ -1.5
UPK1AO00322 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.68□□□□□ -1.5
UPK1AO00322 AP002453.1-201ENST00000492327 668 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 AC112484.3-201ENST00000505910 329 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 AC108103.1-201ENST00000511286 446 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms