Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU6-964P-201ENST00000516524 69 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 AC084851.2-201ENST00000530377 364 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AL390334.1-201ENST00000556395 450 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 ANP32BP1-202ENST00000568553 737 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM1O00151 RPL29P33-201ENST00000587474 316 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AC027334.1-201ENST00000603257 310 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AL008723.3-201ENST00000608926 449 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AL122125.1-201ENST00000616999 600 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 AC211486.4-201ENST00000621495 113 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AL035425.4-201ENST00000624509 1063 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AC099654.15-201ENST00000639802 509 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM1O00151 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM1O00151 SSXP3-201ENST00000442971 1300 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 SAGE3P-201ENST00000619800 1635 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 AC096921.2-201ENST00000561507 1916 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM1O00151 AC010132.4-201ENST00000569883 1368 ntBASIC5.91□□□□□ -1.46
PDLIM1O00151 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM1O00151 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM1O00151 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM1O00151 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 AC114774.1-201ENST00000507410 1770 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 AC018809.2-201ENST00000602436 3823 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PDLIM1O00151 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.9□□□□□ -1.46
PDLIM1O00151 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.9□□□□□ -1.46
PDLIM1O00151 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 AL121839.2-201ENST00000565058 6943 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PDLIM1O00151 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.9□□□□□ -1.46
PDLIM1O00151 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 SNORD94-201ENST00000386037 137 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 RNU11-6P-201ENST00000391127 133 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
PDLIM1O00151 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.9□□□□□ -1.46
PDLIM1O00151 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 AL359092.1-201ENST00000417156 265 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM1O00151 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.9□□□□□ -1.46
PDLIM1O00151 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM1O00151 FTLP19-201ENST00000433300 394 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 SNRPBP1-201ENST00000443634 282 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.9□□□□□ -1.46
PDLIM1O00151 CEACAMP11-201ENST00000455211 583 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 RPL7L1P3-201ENST00000455249 689 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 AC112187.1-201ENST00000455837 479 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.9□□□□□ -1.46
PDLIM1O00151 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM1O00151 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.9□□□□□ -1.46
PDLIM1O00151 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM1O00151 AL390198.2-201ENST00000510553 222 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.9□□□□□ -1.46
PDLIM1O00151 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.9□□□□□ -1.46
PDLIM1O00151 AC113191.1-201ENST00000517759 403 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM1O00151 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM1O00151 ARGFXP2-201ENST00000579304 949 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM1O00151 MIR6885-201ENST00000612241 66 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM1O00151 RAB28P4-201ENST00000622233 665 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 AC005514.1-201ENST00000623521 208 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 AC079776.5-201ENST00000641920 211 ntBASIC5.9□□□□□ -1.46
PDLIM1O00151 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDLIM1O00151 PSMC1P6-201ENST00000477233 1319 ntBASIC5.9□□□□□ -1.47
PDLIM1O00151 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.9□□□□□ -1.47
PDLIM1O00151 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDLIM1O00151 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDLIM1O00151 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDLIM1O00151 FANCD2P2-201ENST00000437591 1400 ntBASIC5.9□□□□□ -1.47
PDLIM1O00151 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 AP001541.1-201ENST00000623322 1904 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 AP001029.2-203ENST00000589795 4910 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms