Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P1B2RPK0 CCNT2P1-201ENST00000423082 1315 ntBASIC6.5□□□□□ -1.37
HMGB1P1B2RPK0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 SNORD1C-201ENST00000363315 78 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 RAN-201ENST00000392367 780 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 RN7SL188P-201ENST00000469842 285 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 METTL15P1-201ENST00000481421 1045 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 TAAR3P-202ENST00000481759 1025 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC091849.1-201ENST00000509920 121 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 DCAF13P2-201ENST00000514188 555 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 OR52H2P-201ENST00000514607 902 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 SNORA70.11-201ENST00000515987 138 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 SNORA70.13-201ENST00000516116 138 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 SNRPCP6-201ENST00000528310 210 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AL445383.1-201ENST00000554689 874 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC068714.1-201ENST00000559623 800 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AP003497.2-201ENST00000624220 967 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC004656.1-201ENST00000568479 4951 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC023245.2-201ENST00000530760 2978 ntBASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P1B2RPK0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 CASC19-248ENST00000641674 1356 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AL450326.2-201ENST00000421913 1962 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AL022322.2-201ENST00000624072 20397 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 RNU6-31P-201ENST00000384388 108 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 RNU6-225P-201ENST00000384613 103 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AL359092.1-201ENST00000417156 265 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 RPS10P21-201ENST00000430654 475 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 PFN1P11-201ENST00000445829 389 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 TAAR4P-201ENST00000454843 1039 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 CCDC75P1-201ENST00000469247 791 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 CYP4F27P-201ENST00000514557 494 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 RNA5SP422-201ENST00000516778 111 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AC136777.2-201ENST00000522979 358 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 CRADD-211ENST00000552983 839 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB1P1B2RPK0 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms