Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPL12P23-201ENST00000405880 490 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 AC092393.1-201ENST00000439625 742 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 BMS1P10-201ENST00000443754 1120 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 GAPDHP20-201ENST00000444107 1007 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 OSTCP1-201ENST00000455507 450 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 RNU7-125P-201ENST00000458760 62 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 RPL23AP37-201ENST00000479658 549 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 snoZ278.1-201ENST00000517059 112 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 RNU6-232P-201ENST00000517144 64 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 SNX18P10-201ENST00000625014 519 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 AL049541.2-201ENST00000626377 555 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 LINC01808-202ENST00000641680 1116 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 SEC63P2-201ENST00000503863 1939 ntBASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.24□□□□□ -1.09
TMEM88BA6NKF7 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 MTND4P4-201ENST00000439033 1366 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC018688.1-201ENST00000636528 1754 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AF121897.1-201ENST00000411867 3980 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 Y_RNA.77-201ENST00000362962 107 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 RNA5SP77-201ENST00000365394 120 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 SNORD116.1-201ENST00000365628 92 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC004386.1-201ENST00000393214 761 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC010385.1-201ENST00000412374 256 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC079355.1-201ENST00000421770 223 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 HSPE1P16-201ENST00000426640 348 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 COL11A2P1-205ENST00000441798 676 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 BZW1P2-201ENST00000473537 826 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 MTND3P7-201ENST00000474435 343 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC091860.1-201ENST00000505723 432 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC022296.2-201ENST00000512424 202 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 MTND5P13-201ENST00000513046 1079 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 MTATP6P1-201ENST00000514057 681 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 MTCO1P49-201ENST00000523429 802 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 NANOGNBP2-201ENST00000544753 553 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 DPPA3P2-202ENST00000557188 1219 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 MIR6768-201ENST00000610734 72 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms