Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC009729.1-201ENST00000548873 1133 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC114477.1-201ENST00000605097 605 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 SNORA74.4-201ENST00000607595 199 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC013489.3-201ENST00000623274 517 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 TUBBP10-201ENST00000427668 1301 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 RPL31P11-201ENST00000426558 1558 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 AC019072.1-201ENST00000604535 1551 ntBASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.11□□□□□ -1.59
KCNIP3Q9Y2W7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AP005432.1-201ENST00000580891 3485 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 RNA5SP140-201ENST00000364524 92 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 RNU6-167P-201ENST00000384292 106 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 USP24P1-201ENST00000433802 779 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 CHCHD4P5-201ENST00000436684 427 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 CUBNP2-201ENST00000443534 1139 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 RN7SL284P-201ENST00000498823 275 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 RN7SKP196-201ENST00000516267 345 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AC138832.1-201ENST00000522871 556 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 CR383656.5-201ENST00000547616 1340 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AP006587.6-201ENST00000582128 1091 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 DYNLL1P1-201ENST00000595442 269 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AC012175.1-201ENST00000603755 531 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01808-203ENST00000641932 1643 ntBASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.1□□□□□ -1.59
KCNIP3Q9Y2W7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KCNIP3Q9Y2W7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
KCNIP3Q9Y2W7 AC095038.1-201ENST00000429248 1591 ntBASIC5.09□□□□□ -1.59
KCNIP3Q9Y2W7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
KCNIP3Q9Y2W7 AL158152.1-201ENST00000602652 1435 ntBASIC5.09□□□□□ -1.59
KCNIP3Q9Y2W7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
KCNIP3Q9Y2W7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KCNIP3Q9Y2W7 SNORD35A-201ENST00000363389 86 ntBASIC5.09□□□□□ -1.59
KCNIP3Q9Y2W7 RN7SKP1-201ENST00000365525 307 ntBASIC5.09□□□□□ -1.59
KCNIP3Q9Y2W7 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.09□□□□□ -1.59
KCNIP3Q9Y2W7 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms