Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 MTND5P23-201ENST00000430812 1655 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC003985.2-201ENST00000562268 1669 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 CCNT2P1-201ENST00000423082 1315 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 RNU6-152P-201ENST00000384037 107 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 GABARAPL3-201ENST00000412799 354 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC007562.1-201ENST00000421819 517 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 RNF19BPX-201ENST00000426224 625 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 EMC3-AS1-205ENST00000438698 534 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC023274.2-201ENST00000445264 521 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC104629.2-201ENST00000468627 598 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 RPS4XP17-201ENST00000479057 754 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 RN7SL502P-201ENST00000481857 290 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 RPL37AP8-201ENST00000494116 276 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 RNA5SP96-201ENST00000516041 107 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 RN7SL475P-201ENST00000583379 298 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 DYNLL1P1-201ENST00000595442 269 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC012213.4-201ENST00000606457 354 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AL592494.3-201ENST00000609485 464 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC015922.4-201ENST00000612568 690 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC020923.1-201ENST00000624021 917 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AL162377.2-201ENST00000624532 337 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC018659.2-201ENST00000624690 715 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AC007114.2-201ENST00000576014 4281 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AP000547.3-204ENST00000588548 2523 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 HSPD1P8-201ENST00000400121 1658 ntBASIC6.04□□□□□ -1.44
BRF2Q9HAW0 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.04□□□□□ -1.44
BRF2Q9HAW0 MAPK10-261ENST00000641050 3109 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC217777.1-201ENST00000570034 1471 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AL356317.1-201ENST00000396110 1436 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC140479.2-201ENST00000421567 3130 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 FUNDC2P3-201ENST00000334716 533 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 RNA5SP85-201ENST00000365378 119 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AL445238.1-204ENST00000400311 463 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 OR1F12-201ENST00000402365 945 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms